Tetranychus urticae (two-spotted spider mite): 107369978
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Entry
107369978 CDS
T04901
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
tut
Tetranychus urticae (two-spotted spider mite)
Pathway
tut03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tut00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107369978
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tut03041
]
107369978
Enzymes [BR:
tut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107369978
Spliceosome [BR:
tut03041
]
Complex A
U2 snRNP components
U2 related factors
107369978
Complex B
107369978
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RPAP1_N
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
107369978
NCBI-ProteinID:
XP_015793433
UniProt:
T1L3L6
LinkDB
All DBs
Position
Unknown
AA seq
845 aa
AA seq
DB search
MNDDIDMELSDGEPSKSTNPTEEDDEEDPLDAYMKTIRQDLAKLRGSVVRKASDKNVYFG
VSKKKKVEKGELLEQNQDALEYSSEEEGTSAEDLEAMNTNLQSQVNKTKKLLTITKEDIT
YIPFNKNFYIEVPELANMTPQEVEAYREELEGIKVKGKGCPKPIKTWAQSGVSKKVMDIL
KRHNYTKPSPIQAQAIPAIMSGRDIIGIAKTGSGKTLAFLIPMFRHILDQPPLAPGDGPI
ALIMSPTRELATQIWADCRKFSKSLKLRAVCVYGGTPISEQIGALKPGAEIVVCTPGRMI
DMLAANGGRVTNLRRCTYLVLDEADRMFDMGFEPQVTRIIENMRPDRQTVMFSATFPRIM
EALARRILNKPIEIQVGGRSVVCKDVEQQVILIEEEDKFLKLLEILGQYLEGEHSAIIFV
DKQEKADTLLRELMHASYSCLALHGGIDQQDRDSTISDFKNNRIRVLIATSVAARGLDVK
HCYLVINFDCPNHYEDYVHRCGRTGRAGNKGFAFTFITRDQAKFSGDIIKALELSGNTPP
EALQDLWRSYKEKLELEGKKVKSSSGFYGKGFKFDEAEAQMAIDKKKLQKAALGIQDSDD
EDVDADIDQEIENMLAPKQTVKQVSKTKATATGANGETSNNGNGSTPLVVPDTANAKFEL
AKKLASRIKLPGGKTTSAAQAFLKGESSPSISSALSAKSIAEAKAERINAKLNYVPKDSE
YNEDDANQDEHASGSDVFLRFEEELEINDFPQQARWRVTSKEALAQISEYSESGITVRGT
YIAPGAKPGLTPDGKEERKLYLAIEGTSELSVKKARDEIIRLIKEEIVKLQNSYQPINKG
RYKVI
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacgatattgatatggagttatccgatggtgagccatcaaaaagtaccaaccct
actgaagaggatgacgaagaggatccattggatgcttatatgaaaactatccggcaagat
ttggccaaattaagaggaagtgtagtgcgtaaagcatcggacaagaatgtttatttcggt
gtttctaaaaagaaaaaagtggaaaaaggtgaattactcgagcagaaccaagatgctttg
gaatattcatcagaagaagaagggacttcagctgaggatttagaagcaatgaacactaac
ttgcagagtcaagttaataagacgaaaaagcttctcaccattacaaaagaagatataact
tatatacctttcaataaaaacttttatattgaagtccctgaactagcaaatatgacacct
caagaagttgaagcttatcgagaagaattggaaggaatcaaagttaaaggaaaaggttgc
cctaaaccgattaaaacatgggcgcaatccggtgtgagtaaaaaagttatggacatcctt
aaacgccacaattataccaaaccatctccaatccaagctcaagctatacctgccatcatg
tctggtcgtgatattattggaattgctaaaacaggctccggcaaaactttagccttttta
attccaatgtttcgtcacattctagatcaacctcctcttgctcctggtgatggtccaatc
gctctaatcatgagtccaactcgagaacttgctacacaaatttgggctgattgtagaaaa
ttttctaaatctttaaaattgagagctgtttgtgtttatggaggaactcctatttccgaa
caaattggcgctcttaaacctggcgctgaaattgttgtttgtactcctggtcggatgata
gacatgctggcagctaatggtggtcgtgttacaaatttgagaagatgtacatacttggta
cttgatgaggccgatcgtatgtttgacatgggttttgaaccacaggtaactagaataatt
gaaaacatgagacctgatagacaaactgtcatgttttcagctacttttccaaggataatg
gaagctttggctcgacgaatattgaataaaccaattgaaattcaagttggaggtcgatct
gtcgtgtgtaaagatgttgaacaacaagttatccttatagaagaagaagacaagttcttg
aaattgttggaaattttaggacagtacttagaaggagaacacagtgctataatatttgta
gataaacaggaaaaggctgacactctcctacgtgaattgatgcatgctagctatagctgt
ttggctcttcatggaggaattgatcagcaagatcgtgactctactatttctgacttcaaa
aataatcgtattagagtattaatagcaacttctgttgcagctcgtggtctcgacgtgaaa
cattgttacttggtaattaactttgactgtcctaatcattatgaagactatgttcatcgc
tgtggtagaactggaagagctggtaataaaggttttgccttcacttttataactagagac
caagccaagttttctggtgatattataaaggctctcgagttatcaggtaacactccacca
gaagcactacaagatttgtggcgcagctataaagaaaagttggaattggaaggtaaaaaa
gtgaaaagttcttcaggtttttatggcaaaggattcaagttcgatgaagctgaagctcaa
atggccattgataaaaagaaacttcaaaaagctgctttaggtatccaagattctgatgat
gaagatgttgatgcagatatcgatcaagaaattgaaaatatgcttgcacctaaacaaaca
gtgaaacaagtttcgaagacaaaagcaacagcaacaggagctaacggagaaacatcaaac
aatggaaatggttcaactccattagttgtgccagatactgcaaatgctaaatttgaatta
gcgaagaagttagcttctcgaatcaaacttccaggtggaaaaacgacttctgctgctcag
gctttccttaaaggtgaatcaagtccaagtatatcctcagccttgtctgctaaatcaatt
gctgaagctaaagcagagaggatcaatgcgaaacttaattatgttcccaaagattctgaa
tacaatgaagatgacgctaatcaagacgaacatgcaagtggcagtgatgtgtttctacga
ttcgaagaagaacttgaaattaatgatttcccacaacaagcaagatggagagtcacaagt
aaagaagcgctggctcaaatatctgaatactctgagtctggtattactgtcagagggacg
tatattgcccctggagctaaaccaggtctcacccctgatggcaaagaggaaaggaaactt
taccttgctattgaaggtacatctgaactttccgttaaaaaggctcgagacgagattatt
cgtttaatcaaagaagagattgtcaaacttcaaaactcttatcaaccaattaacaagggt
cgatacaaagttatttaa
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