KEGG   Trichomonas vaginalis: TVAG_2v0210980
Entry
TVAG_2v0210980    CDS       T01022                                 
Name
(RefSeq) chromatin disassembly
  KO
K11648  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
tva  Trichomonas vaginalis
Pathway
tva03082  ATP-dependent chromatin remodeling
tva03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:tva00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    TVAG_2v0210980
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    TVAG_2v0210980
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:tva01009]
    TVAG_2v0210980
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tva03021]
    TVAG_2v0210980
   03036 Chromosome and associated proteins [BR:tva03036]
    TVAG_2v0210980
Protein phosphatases and associated proteins [BR:tva01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     TVAG_2v0210980
Transcription machinery [BR:tva03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     TVAG_2v0210980
    SWI/SNF complex
     TVAG_2v0210980
Chromosome and associated proteins [BR:tva03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    TVAG_2v0210980
   PBAF complex
    TVAG_2v0210980
   SWI/SNF complex
    TVAG_2v0210980
SSDB
Motif
Pfam: SNF5
Other DBs
NCBI-GeneID: 4753663
NCBI-ProteinID: XP_001308829
UniProt: A2FGR3
LinkDB
Position
IV:complement(32809213..32810142)
AA seq 309 aa
MEPLPVLLPDEIVPFFINIVFDDQRLFEIIQVKLNEADPEEMTKTLTYDLKIQPIEASIL
SAIESQLEEYKKLTEMVPSTEWAKNGSAVHVLLIEASTESVVYSDQFEWDIFDRTMNPDE
FSRLTLEELALPAEFINTVSAQIRHQVIRLRCMHCFPDKFAEYIKLNPISSPQTITGFRP
VSDLIDVSPVVGLRPGRESKSTSGTRDRDYRHQRRANNRASLSFNTALHRADDVAVIQVK
LVPTVRAVPMPEDNPNINLAAIPSMLNDPEVMADDTRKVTQKLEQARYCPAPTQFSGDES
DNESENDMY
NT seq 930 nt   +upstreamnt  +downstreamnt
atggagcctttaccagttctgttaccagacgaaatcgttccattttttataaacattgtt
tttgatgaccagcgtctgttcgaaatcatccaagtcaaactaaacgaagcagatcctgaa
gaaatgacaaaaactttaacatacgatttaaaaattcaaccaattgaagcttcaattcta
agcgcgatagaatcacaacttgaggagtataagaaacttacagaaatggttccatctact
gaatgggcaaaaaatggatctgcagttcatgttcttcttattgaagcatcaactgaatcc
gttgtatacagtgaccagtttgaatgggacattttcgaccgtacgatgaaccctgatgag
ttctcaagattaactcttgaagaattagctctacctgcagaatttattaacacagtttca
gcacaaattagacatcaagttatccgccttagatgtatgcactgttttccagataaattt
gccgaatatattaaattgaatccaatatcttcaccacaaacaattacaggattcagacca
gtatcagatctcattgatgtatcaccagttgttggccttagaccaggtcgcgagtctaaa
agtacttcaggaacaagagatcgtgattatagacatcaaaggagagccaacaacagggca
agtttatcatttaatactgcattacatagagctgatgatgtagccgttatccaagttaaa
ttagttccaacagttagagctgtaccaatgcctgaagataatcctaacattaacttagca
gctataccatcaatgcttaatgatccagaagttatggctgacgatacaagaaaggttaca
cagaagctcgaacaagcaagatattgccctgcacctactcaattctctggcgatgagtca
gataatgaatctgaaaatgatatgtattga

DBGET integrated database retrieval system