Tachysurus vachellii: 132842595
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Entry
132842595 CDS
T09596
Name
(RefSeq) RNA binding protein fox-1 homolog 3-like isoform X1
KO
K14946
RNA binding protein fox-1
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tvc03041
]
132842595
Spliceosome [BR:
tvc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
132842595
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
132842595
NCBI-ProteinID:
XP_060721320
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All DBs
Position
3:3459735..3647912
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AA seq
373 aa
AA seq
DB search
METPTWTDSGVCKTGSLAVFRNAVCSGFLTQQLWHLGLPLLHTLGNQEATNPVDAMAQSY
TPAQFPPPPQNGIPGDFATTHALPTQDYTGQSRVPEHTLTIYTPTQTHSDPANSDSNTTT
ITTNTTDDVTQTDMLPSSESPEKQQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF
NERGSKGFGFVTFETSTDADRAREKLNGTIVEGRKIEVNNATARVMTNKKAANPYTNGWK
LNPVVGAVYAPELYAVTGFPYAPTGTAVAYRGANLRGRGRAVYNTFRTAPPPPPIPTYGA
VVYQDGFYGAEIYGGYAAYRYAQPATATAYSDSYGRVYATADPYTHTISPAATYSVGTMA
SLCRGAYSRFTPY
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggagactcccacctggacagatagcggtgtgtgtaagactggaagtctagccgtgttc
aggaacgcggtgtgtagtggattcctcacgcagcagctctggcatttaggactcccgctt
ctacacacactgggtaaccaagaggcgaccaatccggtggacgcgatggctcagtcctac
accccagcgcagtttcctcctcccccacagaacggtatcccaggagacttcgccacaacc
cacgcccttcccacacaggactacacaggacagagccgagtacctgaacacaccctgact
atctacactcccacgcagacacacagcgatcctgcaaacagcgatagcaacactacaacc
atcaccaccaacacaacagatgacgtgacacaaacagacatgctgccatcctcggaatcg
ccggagaaacagcagcccaaacgactccacgtgtccaacatccccttccgtttccgtgac
cctgacctcagacagatgttcgggcaatttgggaagattttagatgtggagattattttt
aatgaacgaggatctaagggctttggttttgtaacttttgaaacgagcacagacgcagat
cgagcacgggagaaactaaacggtacaatcgtagagggacgcaagatcgaggtgaacaac
gctacagccagagtgatgaccaacaagaaggcggcgaatccttacaccaacggctggaag
ctgaatcctgtggtgggagccgtttatgcacctgaactttacgcagtaacagggtttccc
tacgcacctacagggacagcagtagcatacagaggagctaatttaagaggaagaggacga
gccgtttataacacattccgcacagctcctcctcctccacctatccccacctacggagct
gttgtttatcaggacggattttacggtgctgagatctatggaggctatgcagcgtacaga
tatgcccagcctgccacagctactgcatacagtgacagctatggtagagtctatgcaacg
gcagatccctacactcacacgatcagcccggctgctacatacagcgtcggcacaatggct
agcctctgccgaggagcgtacagtcgcttcacgccctactaa
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