Tachysurus vachellii: 132842758
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Entry
132842758 CDS
T09596
Symbol
gtf2h4
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
tvc
Tachysurus vachellii
Pathway
tvc03022
Basal transcription factors
tvc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
132842758 (gtf2h4)
09124 Replication and repair
03420 Nucleotide excision repair
132842758 (gtf2h4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tvc03021
]
132842758 (gtf2h4)
03400 DNA repair and recombination proteins [BR:
tvc03400
]
132842758 (gtf2h4)
Transcription machinery [BR:
tvc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
132842758 (gtf2h4)
DNA repair and recombination proteins [BR:
tvc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
132842758 (gtf2h4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
132842758
NCBI-ProteinID:
XP_060721583
LinkDB
All DBs
Position
3:complement(7512446..7524513)
Genome browser
AA seq
474 aa
AA seq
DB search
MKLRVQLQCKNLHEYLKELSPDILDRLYNHPATCLAVYRELPSLAKNYVMRMLFLDHALP
QAAVALWVKKDSQKDHDKCVSMLTGLRLWHSQQLQGGLQGIVLNPVFKDNLRIAVLGGGK
PWADEGSSLGPDRHARDIESLDRYAMERWEVILHFMVGSPSAAVSQDLAQLLIQAGLMKS
EAGEAPCITSAGFQFLLLDTASQLWYFTLQYLKTVQSRGMDLVEILSFLFQLSFSTLGRD
YSVEGMSESLLTFLQHLREFGLVFQRKRKSRRYYPTRLAITLAAGVTANSSASSSSSSST
SSYSTDLTLSSGTGDSGFIVVETNYRVYAYTNSELQIALVALFSEMLYRFSNVVVAQVTR
ESVQQAIANGITAQQIIHFLRTRAHPVMFKQTPVLPPTITDQIRLWELERDRLQFTEGVL
YNQFLSQADFEVLRDRAQGLGVLVWQNPQHRVMVVTPHGHSEVRRFWKRQKSHT
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcagagtacaactgcagtgcaagaaccttcatgaatacctgaaggaactgagt
ccagacatcctcgacagactgtacaaccacccagctacatgtctcgctgtttacagggag
cttccatctctggcaaagaattacgtgatgcgaatgctgttcctggatcacgccctcccg
caagcagccgtggcattgtgggtcaaaaaagacagccaaaaggatcatgacaagtgtgta
tccatgctgactggactgagactgtggcacagccagcagctgcagggaggccttcagggc
atcgtgcttaaccctgtgttcaaggataacctgaggattgcagtgcttggaggaggtaag
ccgtgggcagacgagggcagcagtctcggccctgatcggcatgcgagggacatagagagc
ctggatcgctacgccatggagcgttgggaggtcatcctgcacttcatggtgggctccccg
agcgccgcggtcagccaggacctcgctcagcttctcatccaggccggcctcatgaagagt
gaggctggtgaagcaccgtgcatcacttcagctggctttcagtttttgctactcgacacg
gcctctcagctgtggtatttcaccctgcagtacctcaaaacagtgcagtctagagggatg
gacctcgtggagattctttccttcctgtttcagctgagtttctccaccctcggcagggac
tattctgttgaaggcatgagcgagtctctgctgacgttcctgcagcacttgcgagagttc
ggcctggtttttcagagaaagaggaagtcaaggaggtactaccccactagactggccata
acgctggctgccggagtcactgccaactcttcagcctcctcctcatcctcttcttccacc
tcctcgtactctactgatttgactctttcctcaggaacaggagactcgggtttcattgtg
gtagaaaccaactaccgcgtgtacgcatacacaaactcggagctgcagatcgctctggtt
gctctcttcagcgagatgctctatcggttttctaacgtggttgtggcgcaggtcaccaga
gagtctgtgcagcaggctattgctaacggcatcacagcacaacagatcatccacttcctg
aggaccagagcacatcctgttatgttcaaacagacgccggtacttcctccaaccatcaca
gatcagatcagactgtgggagcttgaaagagatcggctgcagtttacagaaggcgtattg
tacaaccagttcctgtcacaggctgattttgaggttctgcgcgatagagctcagggtttg
ggagtgttggtgtggcagaacccacagcacagggtcatggtggtgacgccacacggacac
agcgaggttaggaggttctggaagagacagaagagtcacacgtag
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