Tachysurus vachellii: 132844203
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Entry
132844203 CDS
T09596
Symbol
her6
Name
(RefSeq) hairy-related 6
KO
K06054
hairy and enhancer of split 1
Organism
tvc
Tachysurus vachellii
Pathway
tvc03460
Fanconi anemia pathway
tvc04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
132844203 (her6)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
132844203 (her6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tvc03000
]
132844203 (her6)
03400 DNA repair and recombination proteins [BR:
tvc03400
]
132844203 (her6)
Transcription factors [BR:
tvc03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
132844203 (her6)
DNA repair and recombination proteins [BR:
tvc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex binding factors
132844203 (her6)
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Gene cluster
GFIT
Motif
Pfam:
Hairy_orange
HLH
Motif
Other DBs
NCBI-GeneID:
132844203
NCBI-ProteinID:
XP_060723401
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All DBs
Position
4:3281978..3283947
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AA seq
271 aa
AA seq
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MPADMMEKNSSSPVAATPASMNTVPDKPKTASEHRKSSKPIMEKRRRARINESLGQLKTL
ILDALKKDSSRHSKLEKADILEMTVKHLRNMQRAQMTAALNADPTVLGKYRAGFSECMNE
VTRFLSTCEGVNAEVRTRLLGHLANCMTQLNAMNYTAQAHAGPAPPPPPTFGQPVVQIPG
ATHVPVPVSVPGCKSAPPSGASPSDAAKVYGGFQLVPATDGQFAFLIPSGAFTPGGPVIP
VYASGAATPLPAAAASPREASLTSDSVWRPW
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgatatgatggaaaagaactcgtcttccccggtggctgcgaccccggcgagc
atgaacaccgtcccggacaaacccaagacagcctccgagcacagaaagtcatcgaaacct
attatggagaaaagaagacgagctaggatcaacgaaagcttgggtcaactcaaaacgctc
atcctggacgctctgaaaaaagacagctccagacactccaagctggagaaggctgatatc
ctggagatgaccgtgaagcacctcaggaacatgcagcgcgcgcagatgaccgctgctctg
aacgcggaccccactgtgctcggcaagtaccgcgcgggcttcagcgagtgcatgaacgag
gtgacgcgttttctgtccacgtgcgaaggcgtaaacgccgaggtgcgcacgcgactgctc
ggccacctcgctaactgcatgacccagctgaacgcaatgaattacacggcgcaggcgcac
gccggacccgcgccgcctcctccgccgaccttcggccagcccgtggtgcagatccccgga
gcgacgcacgtccccgtgccagtctcggtgccggggtgcaagagcgcgcctccatccggc
gcgtcgccgtccgacgctgccaaggtgtacggcggcttccagctcgtcccggccacagac
ggacagtttgcctttttgattcccagcggcgcgttcacacccggcggccccgtgatcccg
gtgtacgcgagcggtgcggccacgcccctcccagcagccgcagcgtccccgcgcgaggca
tcgctcacttcagactccgtctggaggccttggtag
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