Tachysurus vachellii: 132845490
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Entry
132845490 CDS
T09596
Symbol
ift140
Name
(RefSeq) intraflagellar transport protein 140 homolog
KO
K19672
intraflagellar transport protein 140
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tvc03037
]
132845490 (ift140)
Cilium and associated proteins [BR:
tvc03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
132845490 (ift140)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Clathrin
ANAPC4_WD40
Coatomer_WDAD
tRNA_int_end_N2
Rax2
Motif
Other DBs
NCBI-GeneID:
132845490
NCBI-ProteinID:
XP_060725467
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All DBs
Position
5:complement(1609195..1672319)
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AA seq
1461 aa
AA seq
DB search
MAVYFDHRIDAPDSDRETTLITWHTAQPLLAVGSFSPASGGCVDIYLQQGERVELCHVER
VCHAVLLRWHPTKPVLAVGWETGETLLLTHPHGENTPLPNNTHTACITLLEWSCNGARLV
TGDQTGVLVVWKLDARGRLNGTHITKQTYNKPLTNCIFRPTPPTEDVAMLAKAAVSGDEE
ALDKFNWKKSGKRGGVWSPGSQEGLIIYVSTTDGSVYSVDEHGRSVHLLTVEGNVQKLCY
LERRAVLAVVTDSLLLSQFSLDSEGGAQELSKVKLSGRGGQSLDMVWTETGLLITASGDQ
IIRLWDLERDDNYVLSLDEKLGYEKGELLNCVSFCSAKAVLAAGTSRGRVAMWQMVTLTN
QKEETKTQWRLQTPTELEGNITQLQWGSSLQLLAVCNSSTVLILSEHVMSSHYNQQGAAM
QLSPTQISLTCFTSNTHFTLRTDTHVRAVQVTKDTVTVWDGRNVTVYEKSGQSLRSIASF
QCDSAALAVHEENIYTVEPNRVQVRTQQGTVKQLLVFTEAEGNPVILSVCGLYLAVGTDT
VHIRVFDLSRREAKPLCNAKNMAELIPDLGALKSVKCNANGSQLSMLITQVNGRPAHKVY
FYDVEMDTLSHFDFFTGRPFSGLSQPDDSHSAQHAEAELAGRYPVSQFWDESEPRLFVCE
TVLVNSEYRITNQSHATDKVDVSVVTFFMTQEHGLLLHDSQPRPAALQGLLALDTPYYYY
TCKPGQLDTTSPTPAAVPSSSHMVVRRALRDFVGLESCEKQTRDAMLNFSFYLTIGDMDE
AFRAIKLIKSEAVWENMARMCVKTRRLDVARVCLGNMGNARTARALREAEKEPEMEAQVA
MLATQLGMLDEAEALYRSSGRFDLLNKFYQARGDWQKAIETAESHDRIHLRTTYYSYAQH
LENTGDKSLGVTYYERSDTHRFEVPRMLMEDSVSLELYINKMKDKCLYKWWGHYLESQSE
MESALRYYDYAQDYLSQVRVHCYLGNIQKASEIANETGNRAASYHVARQYESQDQISQSV
HFYTRAQAYNNAIRLCKENHMDEQLMNLALLSNPEDMMDTAAYYEEKGEHMDRAVMLYHK
AGCVSKALELAFSTEQFGALQLIAEELNENSDPAVLTRCSDFFIKHTHYHKAVQLLVAAK
KYHEALQLCLDQNLTITEDLAESMTVSQSSAHLSEEERKELLEQIADCCMRQGNYHLATK
KYTQAGKKIKAMRALLKSGDTEKIVFFAGVSRQKEIYVMAGNYLQSLDWRKDPEIMKNII
SFYTKGRALELLAGFYQACAQVEIDDYQDYEKAYGALNEAYKCLSKAKSRHGDETDERLT
QLTHHLTLIKRFIQARRLYEQDPAAALSACECLLEECDLDPAVRVGDVFGFIIEHHCQHG
SYQKAWMKLEELRRLHPSVNVSVYVSARSLDALQDAVGVRINHGDTTHTNTLSRDADNTH
TRTQSDGEDEDEVEEDENLND
NT seq
4386 nt
NT seq
+upstream
nt +downstream
nt
atggctgtttattttgatcaccgtattgatgcaccggacagtgacagagagacgactcta
atcacgtggcacactgctcagcccttattggctgtcggctcctttagccccgcctccgga
ggctgtgtagacatttacctgcaacagggtgagcgtgtagagttgtgtcatgtggagcgt
gtgtgtcatgcggtccttttgcgttggcatcccactaaaccggtgctggctgtgggctgg
gaaacaggagaaactctactgctcacacaccctcatggagaaaacacacccctgcccaac
aacacacacaccgcctgtatcacactgctggagtggagctgcaatggagccagactggtc
acaggagatcagacaggggtgctggttgtgtggaagctggatgctcggggaagactgaat
ggaacacacataacgaaacagacctacaataaacccttaaccaactgcatcttcagaccc
acaccacccacagaagacgttgcaatgttggcaaaagcagcggtcagtggtgatgaagag
gctctggataaatttaattggaagaaaagtggtaaaaggggcggagtttggtctcctggt
tcacaagaaggactcatcatctacgttagcactactgatggttctgtgtacagtgtggat
gagcacggccgtagtgtacacttgctgactgtagagggcaacgtgcagaaactgtgttat
ttggagcgcagggccgtacttgctgttgtcacagactccctgctgctctcacagttcagc
ctcgattcagaaggtggcgctcaggagctcagcaaggtgaagctaagtggtaggggaggt
cagagcctagacatggtgtggacggagactggcctgctaatcactgcatcaggagatcag
atcatcaggttgtgggatctggagagagatgataactatgtcttgtctctggatgaaaaa
cttggctatgagaaaggagagctgctcaactgtgtgtccttctgttctgctaaagcggtc
cttgcagcaggcaccagtagggggcgtgtcgctatgtggcagatggtgacactgaccaat
cagaaagaagaaacaaaaactcagtggaggttacagacacctacagaactggagggaaac
attacacagttacagtggggatccagtttgcagctcttggcggtgtgtaacagcagtacg
gtgttaattctgagtgaacatgtgatgagttctcactacaaccagcagggggcagcaatg
cagctctcacccacacagatcagcctgacctgcttcacctctaacacacactttacactg
cgcacagacacacatgtcagagctgtgcaggtcaccaaggacacagtgactgtgtgggac
gggaggaatgtaacagtgtatgagaaatcaggacagtctctacgcagcatagcttctttt
cagtgtgactctgctgctctggcagttcatgaagagaatatttatactgtcgagccgaac
cgagtgcaagtccgcacacaacaaggcactgtaaagcagcttctggtgtttacagaggca
gaggggaaccctgtcatactgagtgtgtgtggattgtacctggctgtagggactgacacc
gttcatatcagagtgtttgacctctcacgcagagaggccaaaccactgtgtaacgctaag
aacatggctgaactcattcctgaccttggagctctaaaatccgtcaagtgcaatgctaat
ggcagccaactgagcatgctgatcacacaggtaaatgggcgtcctgctcacaaggtctat
ttctatgatgtggagatggacacactctctcactttgacttcttcactggtcgacctttc
agcggcctctcacaacccgatgacagccacagtgcccagcatgcggaggcagagcttgca
ggtcgttatccagtctctcagttttgggatgagagtgagccacgcctctttgtgtgtgaa
acggttcttgtgaactcagagtaccgcatcaccaaccaatcacatgccacagacaaggtg
gacgtgtcggtggtgacgttctttatgacccaggagcatggactcctcctacacgactct
cagcccagaccagctgctctacagggattactggcactggatacaccatactactactac
acctgcaagccaggacagctggacacaacgtccccgacccctgccgcagttccctcctcc
agccatatggtggtgcggcgagctttgcgtgactttgttggtttggagagctgtgagaag
cagaccagagatgccatgctgaacttcagcttctacctcaccatcggggacatggatgag
gccttcagagccatcaagctcatcaagagtgaggctgtatgggagaacatggctcgtatg
tgtgtgaagactcgccgtcttgatgtggcgcgcgtgtgtctgggaaacatgggtaacgcc
cgaacagctcgagctctcagagaggcggagaaagagccggagatggaggcacaagtcgca
atgctcgctacacaactcggcatgttggatgaagccgaggctctgtatcgttcctctggg
aggtttgacctgttgaataagttttatcaggcacgtggtgattggcagaaagccatcgaa
acggctgagagtcacgaccgcatccacctgcgcaccacctactacagctacgcacaacac
ctggagaacacaggagacaagagcctgggggttacctattacgagcgttctgatacacac
cggttcgaggttccccgcatgctgatggaggacagtgtgtctctggagctctacatcaac
aagatgaaggacaagtgcctgtataagtggtggggtcattatctggagagccaatcagag
atggagtctgcgctgcgttactatgactacgctcaggattacctgtctcaagtgcgtgtg
cactgctacctggggaacatccagaaggcgagcgagattgccaacgagacgggtaaccga
gcggcatcctatcacgtggcacggcagtacgagagtcaggatcagatcagccaatcggtg
cacttctacacacgggctcaggcgtacaacaacgccatccgtctgtgtaaggagaaccac
atggacgagcagctgatgaacctggcgctgctcagcaacccggaggacatgatggacacg
gctgcctactacgaggagaagggggagcacatggaccgagccgtcatgctgtatcacaag
gctggttgtgtatctaaagctctggagttggcgttcagtacagagcagtttggagcactg
cagctgattgcagaggaactgaatgagaacagtgacccagccgtgctcactcgctgctct
gacttcttcatcaaacacacacactaccacaaggctgtacagctgctagtggctgccaag
aagtatcatgaggcacttcagttgtgtttggaccagaacctgaccatcacagaggatctg
gctgagagcatgaccgtgtcacaaagctccgcccacctctcagaggaggagcgtaaggaa
ctgctggagcaaatcgcagactgctgcatgcgccagggcaactatcacctagcaaccaag
aaatacacacaagctgggaaaaagatcaaggcgatgcgagcgttgctgaagtcaggtgac
acggagaagattgtgttctttgctggtgtgtctcgtcagaaagagatctacgtgatggcg
gggaattacctgcagtctctggactggaggaaagatccagaaatcatgaagaacatcatc
agcttctatacaaaaggacgtgcgctggagctgctcgccggcttctaccaggcctgtgca
caggtagagattgatgactatcaggactatgagaaggcatatggtgctctcaatgaagcc
tataagtgtctgtccaaagccaagagtcgccatggagatgagacagacgagcgactcaca
caactcacacaccatctcacactcatcaagagattcatacaggcgcgcagactgtatgaa
caggaccctgcagcagctctctctgcgtgtgagtgtttgttagaggagtgtgatctggac
cctgcagtgagagtaggagacgtgttcggcttcatcatcgagcatcactgtcaacacggc
agctaccagaaggcatggatgaagctggaggagctgagacgtttacatccctcagtgaac
gtgagtgtatacgtgagcgctcgcagtctggacgctctgcaggacgccgtcggagtaaga
atcaaccatggagacactacacacactaacacactcagccgagatgcagacaacacacac
acacgcacacagagtgacggagaggacgaggacgaagtggaggaggacgagaacctcaat
gactga
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integrated database retrieval system
