Tachysurus vachellii: 132846308
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Entry
132846308 CDS
T09596
Symbol
rbfox1l
Name
(RefSeq) RNA binding protein fox-1 homolog 1-like
KO
K14946
RNA binding protein fox-1
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tvc03041
]
132846308 (rbfox1l)
Spliceosome [BR:
tvc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
132846308 (rbfox1l)
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Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
132846308
NCBI-ProteinID:
XP_060726972
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All DBs
Position
5:28377598..28391809
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AA seq
376 aa
AA seq
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MLSSPAVILQPYGLPVYPQTSCYPSLVQGGPAQEAGPGSNDPALTQVYAAPPSYPPPGQA
PPTPTARLPPLDFSSAHSSSDYPDHHQLRVYQSSQHEGAETIPVNNTDESLAPVTSDPQT
LNVPVAAGGGAGSGSEEDGSGKAQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFN
ERGSKGFGFVTFENASEADRAREKLNGTIVEGRKIEVNNATARVVTKKPQTPLVNAAGWK
INPVMGAMYAPELYTVASFPYPVPTATLAYRGSTLRGRGRAVYNTIRSAATPTAVPAYPG
VVYQDGLYGTEVYGGYPAAYRVAQSPSATATATYSDGYGRVYTTDPYHHSVGPTTTYGVS
TMASLYRGGYNRFTPY
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcctctcctgcggtcatcctgcagccgtacggtctgcctgtctacccacagacc
tcctgctaccccagcctagtgcagggcggtcctgctcaggaggcggggccaggcagcaat
gaccccgcccttacccaggtctatgccgcacccccttcatatccaccaccgggacaagcc
ccacccacacctacagccagactcccgcctcttgacttcagctccgcccactccagctct
gattacccagaccaccatcagctccgggtgtatcagagctctcagcatgagggggcggag
actatacctgtcaataacacggatgaaagtctggctcctgtgacctccgacccccagact
ctaaacgtccctgtggcggcagggggtggagcaggaagtggcagcgaggaggacgggtct
ggaaaagcccagcccaaacgccttcatgtctccaatattcccttcaggttccgggatcct
gacctgaggcagatgttcgggcaatttggcaaaatcctggatgtagagatcatcttcaat
gagagagggtcaaaaggttttggctttgtgacttttgagaacgcatcagaagccgatcga
gcgcgagagaaactcaacgggacaatcgtggaggggagaaagatcgaggtgaacaatgcc
acagccagggtggtaacgaagaaaccacagactccactcgttaacgctgcaggatggaag
attaatcctgtgatgggggccatgtacgctccagaactctacactgtggccagctttcct
tatcctgttcctacagcaacgctggcttacagaggctccaccctgagggggcgtggacgt
gctgtgtataataccattcgctctgcagccacacccactgctgttcccgcctacccaggg
gtggtgtatcaggatggactgtatggaacagaagtctatggaggatatcctgctgcatac
agagtggctcaatctccttcagcaacagctacagctacgtacagtgatgggtacgggaga
gtgtataccactgacccctatcatcactctgtaggtccgaccactacatatggagtcagc
actatggcgagtctgtaccgaggaggctacaaccgcttcaccccatactga
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