Tachysurus vachellii: 132849075
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Entry
132849075 CDS
T09596
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tvc04121
]
132849075
Ubiquitin system [BR:
tvc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
132849075
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_5
U-box
zf-C2H2_11
zf-RING_6
zf-Nse
Motif
Other DBs
NCBI-GeneID:
132849075
NCBI-ProteinID:
XP_060731248
LinkDB
All DBs
Position
7:27241811..27249470
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AA seq
550 aa
AA seq
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MAKTNISLAQDQFSCPICLDLLKDPVTILCGHSFCMVCINGCWDQEDQRDVYRCPQCKET
FTSRISVSKNAVLGDIVEKLKKELQATRPAQFSAGPEDVWCDFCIESKSKAIKSCLVCLA
SFCETHLQPHYESPAFKKHKLVEASRRLQDQICSQHDKLLEVYCRTDQQCICMLCTMDEH
KGHDTVSATTGKAEKREQLVKIQRKYQQSILDKEKKHQELTEAVEFYERSAQRAVQETER
IFADLIKSMERRRSEVTALIRAQEKTAVTRAEDIMTQLEQEITELKRRTAELEELLYTDT
IHFLQRFPSLLDVPESADLHSIRLSPHLSLEDVTAFVSELTDNVEIFCNEFKIISNAVKG
FHIIPLPEPKTREEFLQYSCEFTLDQNTVNKHLCLSEKNTVVTCSETVQQYSVHPDRFDY
YLQVLCRERVCGLCYWEVEWTGRYGVSIAVSYKTISRKGKGTECLFGRNYKSWRLFCYPS
YYSFRHHKEEIKIPFVPSSSRIGVYVDHRAGTLSFYSVSDTMKLLHRVHTTFTQPLYPGF
VVCSGSTIKL
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagactaatatttcattggctcaggatcagttcagctgtccaatctgtctggat
ctactcaaggatccagtgactattctctgtggacacagtttctgtatggtctgtattaat
ggctgctgggatcaggaggatcagagggatgtctatcgctgtcctcagtgtaaagaaacc
ttcacttcaagaatttctgtgagtaaaaatgctgttctgggtgatattgtggagaaacta
aagaaggaactccaagctacacgtcctgctcagttttcagctggacctgaagatgtgtgg
tgtgatttctgtattgagagtaaatccaaagccatcaagtcctgcctggtgtgtctggcc
tctttctgtgaaactcatctccagcctcactatgaatctcctgcctttaaaaagcacaag
ctggtcgaagcctccagacgacttcaggatcagatctgctctcagcatgacaaactgctg
gaggtttactgtcgcactgaccagcagtgtatctgcatgttgtgtactatggatgaacat
aaaggacatgatacggtatcagctacaacaggaaaagctgagaaacgggagcagctggtt
aagatacagagaaaataccaacagagtatcctggataaagagaagaagcatcaggagtta
acagaagctgtggagttttatgagcgctctgcacaaagagcagtgcaggaaactgagagg
atctttgctgatctgatcaaatccatggagagaagacgctctgaggtgacagcactaatc
agagctcaggagaaaactgcagtgactcgagctgaagacatcatgacacaactggagcag
gagataacagagctgaagaggagaactgcggagctggaggagcttttatacacagatacc
atccattttctccagcgtttcccatctctcttggacgttcctgaatctgcagacctacac
tccatcaggcttagtcctcacctttctcttgaagatgtaacagcatttgtttctgaactg
acggacaatgtggaaatattctgcaatgagttcaaaataatatccaatgcagtaaaagga
ttccacattattccacttcctgaacccaaaaccagagaagagttcctacagtattcctgt
gagttcacactggatcaaaacacagtaaataaacacctctgtctgtctgagaagaacacg
gtggtgacctgcagcgaaacagtacaacaatattctgttcatccagacagatttgattat
tatctccaggtgttgtgtagagagcgtgtgtgtggactctgttactgggaagtggagtgg
actggacgttatggggtttctatagcggtgtcatataaaaccatcagcaggaaaggaaag
ggtacggaatgtttgtttggccgaaactataagtcctggagattgttttgctatccttcc
tactactcattcagacatcataaggaagaaattaaaatcccattcgttcctagctcctct
agaataggagtgtatgtggatcacagggcaggaactctgtccttctacagcgtctccgac
accatgaagctcctccacagagttcacaccacattcactcagcctctttaccccgggttt
gtcgtttgctcaggatcaactatcaagctataa
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