Tachysurus vachellii: 132851186
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Entry
132851186 CDS
T09596
Symbol
ctcf
Name
(RefSeq) transcriptional repressor CTCF isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tvc03000
]
132851186 (ctcf)
03036 Chromosome and associated proteins [BR:
tvc03036
]
132851186 (ctcf)
Transcription factors [BR:
tvc03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
132851186 (ctcf)
Chromosome and associated proteins [BR:
tvc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
132851186 (ctcf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-H2C2_5
zf-C2H2_jaz
zf-met
zf-C2HE
DTHCT
Motif
Other DBs
NCBI-GeneID:
132851186
NCBI-ProteinID:
XP_060733832
LinkDB
All DBs
Position
9:complement(14768692..14776955)
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AA seq
892 aa
AA seq
DB search
MRSNRLRPPFCAEPTLQKRERIKTSEGEARSCTSSRTKRRTDRGSCVEFNERINEQKQKV
RDSSFTECRELKRQENREMKYTFTVQVLPMEGGPSEAVVDETGDAFKAKDCKTYQRRRED
EEVEADLLQAAGLEAVDQSVAEGEVTDAVVDAQQQLVEGVVSVNSGVEMMVMDSLDPSLL
QMKTVDGTMATAVGVAGAAHEATVTTVDDTQIITLQVVNMEEQQLGLGELQLVQVPVSAV
PVTATTVEELQGTLVDATAMPKDGEPVICHTLPLPEGFQVVKVGANGEVETVEQEELHGH
EEQSLQQEEEEIPESQNDDPTWAKDPDYTPPVKKTKKTKKSKLRYNTEGEKDMDVSVYDF
EEEQQEGLLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSH
TDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCTDCDMAFVTSGELVRHRRYKHTHE
KPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYE
CYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYIEQGRK
CRYCEAVFHERYALIQHQKSHKNEKRFKCDQCDYACRQERHMVMHKRTHTGEKPYACSHC
EKTFRQKQLLDMHFRRYHDPNFVPTSFVCSKCGKTFTRRNTMARHAENCTGLEGGDGENG
APTKRGRGGRKRKMRSRKDDDDDDSDDQGEPDLDDIDEEDEEEEDVLDDVEMEVEQAPPT
VPVPAPAEPPVKRKRGRPPKNPPKPPPAKNTAIAPTATAIIQVKDEGTGAIENIIVKKEQ
DGLDTSVAASAEPVVEEVEATEGEVEAEQLSVPEAAPNGDLTPEMILSMMDR
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagcaaccgcctcaggccgccattttgtgcggagcctactctgcaaaagcgggag
aggattaaaaccagcgaaggggaagcacgcagttgtacttcgtctcgtactaaacgaaga
acggatcgcgggtcttgtgtcgaattcaacgagaggataaacgagcaaaaacagaaggtc
agagatagctcgttcaccgaatgcagagaattgaagaggcaggagaatagagagatgaag
tacacatttacggtacaggtattacccatggaagggggaccgtctgaagccgtagtggac
gagacaggggacgccttcaaggccaaggattgtaagacgtatcaacgacggcgtgaggac
gaagaggttgaagcggatctactgcaggccgctggtctagaggcagtagatcagtctgta
gctgagggtgaggtgaccgatgcagtggtcgatgcacagcagcagctggttgaaggtgtg
gtgagcgtaaatagtggtgtagaaatgatggtgatggattccctagacccgtcgctgctg
cagatgaagacagtggatggtaccatggccactgctgtgggtgttgctggagcagcccac
gaggccacggtcaccacagtagatgacacacagatcatcaccctgcaggtggtcaatatg
gaggaacaacaacttggtctgggtgaactgcaactagtgcaggtgcctgtatctgctgtg
cctgtcactgccaccaccgtggaagagttgcagggaacattggtggatgctactgccatg
cctaaagatggagagcctgtcatctgtcacacgctaccactcccagagggcttccaggtt
gtgaaagtaggtgccaacggtgaagtggagactgtggagcaggaagagctccatggccat
gaggagcagtctttgcagcaggaagaggaggagattcctgaatcccagaatgatgatcct
acttgggccaaggatcctgactacacacctcctgtcaaaaagaccaaaaagacaaagaaa
agcaagctgcgttataacacagagggagagaaagacatggatgtgtctgtttacgacttt
gaggaggagcagcaagaaggcctgctctcggaggttaatgcagagaaggttgttggcaac
atgaagcctccaaaaccaaccaaaatcaaaaagaaaggtgtgaagaagacattccagtgt
gagttgtgtagctacacctgcccaagacgctcaaacctcgaccggcacatgaagagccac
acggatgaaaggccgcacaaatgccacttgtgtggacgtgccttcaggactgtaactctt
ctgaggaaccatctcaacacacacacaggcacaaggccccacaaatgtactgattgtgac
atggcgtttgtaactagcggtgagcttgtgcgacatcgccgctataagcacacccatgag
aagcccttcaagtgttcgatgtgtgactatgccagtgtggaggtcagcaagctgaagaga
cacattcgctctcataccggagagcgtccattccagtgcagcctgtgcagctatgccagt
agagacacctacaagctgaagagacacatgagaacccattcaggagagaagccctacgaa
tgctacatctgtcatgcacgtttcacccagagtggcactatgaagatgcacatcctgcag
aagcataccgagaatgtggccaagttccactgccctcactgtgacacagtcattgcccgc
aagagtgatttgggtgtgcatctgcgcaagcagcattcctacattgagcaaggcagaaag
tgccgttactgtgaggctgtgtttcatgagcgctacgcactcatccagcaccagaaatcc
cacaagaatgagaaacgcttcaagtgtgaccagtgtgactatgcctgccgacaggagcgt
cacatggtgatgcacaaacgtacccacactggggaaaagccatatgcctgcagccactgt
gagaaaacgttcagacagaaacaacttctggacatgcattttcgacgctaccatgacccc
aactttgtgcccacttcttttgtgtgcagcaagtgtggcaagaccttcactcgcaggaac
accatggccagacatgctgagaactgtactggactggaaggtggagatggggagaatggt
gctccaaccaagagaggccgtggtggcagaaagaggaagatgcgctctaggaaggatgat
gatgatgatgatagtgatgatcaaggagagcctgacttggatgacattgatgaggaagat
gaggaggaggaagatgttctcgatgacgtggagatggaggtagaacaggctccaccaact
gtccctgtcccagcccctgctgagccgcctgtcaagaggaaacgtggtcgacctcccaag
aatcctcccaaacccccccctgctaagaacacagccatagcacccactgcaactgccatt
atccaggtgaaggatgaaggcacgggagccattgagaacatcatagtgaagaaggagcag
gatggtctggatacttcagtggcagcatcagcagagccagtggtggaggaagttgaagcc
acagagggggaagtggaggcagagcagctctccgtccccgaggccgcacccaatggagac
ctcacccctgagatgatcctcagcatgatggaccggtga
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