Tachysurus vachellii: 132851253
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Entry
132851253 CDS
T09596
Symbol
sf3b3
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
tvc
Tachysurus vachellii
Pathway
tvc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132851253 (sf3b3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tvc03021
]
132851253 (sf3b3)
03041 Spliceosome [BR:
tvc03041
]
132851253 (sf3b3)
03036 Chromosome and associated proteins [BR:
tvc03036
]
132851253 (sf3b3)
Transcription machinery [BR:
tvc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
132851253 (sf3b3)
Spliceosome [BR:
tvc03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
132851253 (sf3b3)
Complex B
132851253 (sf3b3)
Complex C
U2 SnRNP specific factors
132851253 (sf3b3)
Chromosome and associated proteins [BR:
tvc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
132851253 (sf3b3)
TFTC complex
132851253 (sf3b3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS1_N
CPSF_A
Motif
Other DBs
NCBI-GeneID:
132851253
NCBI-ProteinID:
XP_060733955
LinkDB
All DBs
Position
9:16670485..16694529
Genome browser
AA seq
1217 aa
AA seq
DB search
MFLYNLTLQRATGITHAIHGNFSGTKQQEIVVSRGKILELLRPDANTGKVHTLLTMEVFG
IVRSLMAFRLTGGTKDYIVVGSDSGRIVILEYHPSKNMFEKVHQETFGKSGCRRIVPGQF
LAVDPKGRAVMIGAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEALEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLTQTEQGDIFKVTLETDEEMVTEIRMKYFDTIPVATAMCVLKTGFLFVSSEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDEQENLSPIMSCQIADLANEDT
PQLYVACGRGPKSTLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVRCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGVEKQDELGEKGTI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRRFVIHPETNNLVLIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPEAIFGAPKAGSGQWASLVRLINPIQGNTLDLVQLEQNEAAFSVAVCRFANGG
DDWYVLVGVSRDMILNPRSVAGGYIYTYRLVGGGEKLEFVHKTPVEDVPLAIAPFQGRVL
IGVGKLLRIYDLGKKKLLRKCENKHVPNLVTGIHTIGQRVVVSDIQESLFWVRYKRNENQ
LIIFADDTNPRWVTTACLLDYDTMAAADKFGNISIVRLPPNTSDDVEEDPTGNKALWDRG
LLNGASQKADIIMNYHIGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHLEMHMRSEFPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMDPHKQKSVAEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtttctgtacaacctgaccttgcagcgtgccactggcatcactcatgccatccatggc
aacttctcaggtaccaagcagcaggagattgttgtttctcgaggaaagattctggagctg
ctgcgccccgatgccaacactggcaaagtgcacacactgctcacgatggaggtgtttggc
attgtccgctctctcatggcattcaggctgactggtggcacaaaagactacattgtggta
ggcagtgattcaggtcgcattgttatcctggaatatcacccatctaagaacatgtttgaa
aaggtgcaccaggagaccttcggcaagagtggctgtcgacgcattgttccaggacagttt
ttggctgtggatcccaaaggcagagctgttatgataggtgctatagagaagcagaaattg
gtgtacattctgaacagagatgcagctgctcgcctcaccatctcctcccctctggaagca
cacaaagctaacacgttggtctaccatgtggttggggtggatgtgggttttgagaaccca
atgtttgcctgtcttgagatggactacgaggaagctgataacgaccccacaggggaagcg
gcagcaaatacacagcagactctgactttctatgagttggaccttggtctcaaccatgta
gtacgcaagtacagtgaggctttggaagagcacggcaacttcctcatcacagtgccaggt
ggctctgatgggccgagcggtgtgctcatttgctcagaaaattacatcacttacaagaac
tttggggaccagccggatatccggtgcccaattccacgcagaaggaatgacctggatgat
ccagagaggggcatgatcttcgtctgctcagccacacacaaaaccaagtccatgtttttc
ttccttacccagactgagcaaggagacatcttcaaggttaccctggaaacagatgaggag
atggtcacagagatcaggatgaaatattttgacaccatcccagtggccactgcaatgtgt
gtgctgaagactggcttcctgtttgtgtcatcagagtttggaaaccattatctgtatcag
atagcacatctgggtgatgatgacgaagaaccagagttctcttccgccatgcctctggag
gaaggagacacctttttcttccagccacgaccacttaagaacctggtgcttgtggacgaa
caggagaacctttcccccatcatgtcctgccagattgctgatttggccaacgaggacaca
cctcagctgtatgtggcatgtggtagaggtccaaaatccacgctaagggttcttagacat
ggtctggaggtctcagagatggctgtgtctgagcttcctggtaaccccaatgctgtgtgg
actgtgaggaggcatgtagaagatgagtttgacgcctacatcattgtgtccttcgttaac
gcaacgcttgtgctgtcgatcggagaaactgtggaagaagtgacagactctggcttcctg
ggaactaccccaactttgtcttgttctctgctgggggaagatgctctggtgcaggtttac
ccagatggtattcgccatatccgagcagataagcgtgtgaacgagtggaagactccagga
aagaaaacaatcgtgcgctgtgccgtgaaccaacggcaggtggtcattgccctgacagga
ggagagctggtgtactttgagatggacccatcaggtcagctgaatgagtacactgagaga
aaggagatgtctgcagatgttgtgtgcatgagccttgcgaacgttccaccaggtgaacag
cgctcacggtttctggctgtgggtttggtggataacacagtgcgcattatctccctagac
ccctcggattgtctacagccactgagtatgcaggctctgcctgcacagccagaatcactg
tgtatagtggagatgggaggtgttgagaaacaagatgagttgggagagaaaggtaccatt
ggctttctctacctcaacattggcctgcagaatggtgtgttactccgcaccgtgctggac
ccagtgactggagacctctctgacactcgcacacgctacctgggctctcgacccgtaaag
cttttcagagtgcggatgcagggccaggaagctgtattggccatgtccagccgatcatgg
ctgagctactcttaccagtcacgtttccatttaacaccactttcctatgaaactctggaa
tatgcctcagggtttgcttcagagcagtgtcctgaaggcattgtggccatctctaccaac
acactgagaattttggctctggagaagctgggtgctgtgtttaaccaggtggcatttcct
ctgcagtatacaccacgtaggtttgtcattcacccagagaccaacaacttggtccttatt
gaaacagaccacaatgcctacactgaagccaccaaggcccagcgcaagcagcagatggca
gaggaaatggtggaggctgcaggagaggatgagcgggagctggctgcagaaatggctgct
gcctttttgaacgagaaccttccagaagcgatctttggtgccccgaaggctggctcagga
cagtgggcctcattggtgcgcctgatcaaccccatccagggaaacaccctggatttggtt
cagctggagcagaatgaagctgcctttagtgtggctgtttgtcgctttgctaatggaggt
gatgactggtatgtgttggtgggtgtctcaagagacatgattcttaacccccgctcagtg
gccggtggctacatttatacctatcgcctggtaggaggtggagaaaaactggagtttgta
cacaagaccccagtggaggatgtgcccctggctattgcacccttccaaggcagagtgttg
attggggtgggcaaactgctgcgcatctacgaccttggcaaaaagaagctgctccgcaag
tgtgagaacaagcatgttcctaacctggtgacgggcatccacaccatcggccagcgtgtg
gttgtgtcggacatccaggaaagtctgttctgggtgcgctacaagcgcaatgaaaaccag
ctcatcatttttgctgatgatacaaacccacgctgggttaccactgcctgcctgctcgac
tatgacaccatggctgcagctgacaagtttggcaatattagtattgttcgtctaccacca
aacaccagtgatgatgtggaggaggaccccacagggaacaaagcactgtgggacagaggc
ctgctcaatggagcttcccaaaaggctgatataattatgaactaccacataggagaaact
gtcttgtcactgcagaagaccacactcatccctggaggctcggagtctctagtgtacacc
actctgtcaggtggcattggcatccttgtgcccttcacctctcatgaggaccacgacttc
ttccagcacttggaaatgcacatgcgctcagagttccctccactttgcggccgagaccat
cttagcttccgttcctactacttccctgtgaagaatgtaattgatggggatctctgtgag
cagtttaactccatggatcctcataagcagaagagtgttgctgaagagttggaccgcaca
ccaccagaagtgtctaagaaactggaagacatccgcacacgttatgccttttaa
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