Tachysurus vachellii: 132852756
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Entry
132852756 CDS
T09596
Symbol
pcgf5a
Name
(RefSeq) polycomb group RING finger protein 5-A isoform X1
KO
K11489
polycomb group RING finger protein 5
Organism
tvc
Tachysurus vachellii
Pathway
tvc03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
132852756 (pcgf5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tvc03036
]
132852756 (pcgf5a)
Chromosome and associated proteins [BR:
tvc03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
132852756 (pcgf5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAWUL
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-RING_5
zf-C3HC4_4
zf-RING_10
zf-C3HC4_3
zf-RING_6
zf-Nse
zf-rbx1
E3_UbLigase_R4
DUF3337
Actin_micro
DUF1272
zf-RING_16
zf-C3HC4_5
TRAF3_RING
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
132852756
NCBI-ProteinID:
XP_060736151
LinkDB
All DBs
Position
10:complement(1048294..1054885)
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AA seq
237 aa
AA seq
DB search
MATQRRHLVKDFNRYITCSVCRGYLIKPTAVTECLHTFCKSCIVQHFEESNECPECGIQV
HETNPLEMLRLDKTLEEIIFKLVPGLREKEEQQEMDFWRKNKSRANGEEGPRAKRARVSE
EEEDREEGEGGDFHRNDPQIAICLDCLRNNGQSGESTVKGLMKKFIRCSTRVTVGTIKKF
LCVKLKLPSSYELDVLCNGEIMGKDHTLEFIYRTRWRLQGDTEYPMVLEYRPRIDFG
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atggcaacccagaggaggcacctggtcaaggactttaaccgctacatcacctgctctgtg
tgccgaggttacctgatcaaacccaccgccgtcaccgagtgcctccacaccttctgtaag
agctgcattgtccaacacttcgaggagagtaacgagtgtcctgaatgcggcattcaagtc
catgaaaccaatcctctagagatgctgaggttggataaaacgctggaggaaatcatcttt
aagctggtgcctggactaagagagaaggaggaacaacaggaaatggatttctggaggaaa
aacaaatcgagagctaatggggaagaaggacctagggcaaaaagggctcgtgtgagtgag
gaagaagaggacagagaggaaggtgaaggaggtgattttcacagaaacgacccacagatc
gctatctgcctggactgcctgaggaacaatggccaatcaggagagagcacagtgaagggt
ctgatgaagaagtttatccgctgctccactcgtgtcactgtcggtaccattaagaagttt
ctttgtgtgaagctgaagctgccgagctcttatgagctggacgttttgtgtaatggggag
atcatggggaaagaccacaccctggaattcatctaccgaacccgctggagactgcagggt
gacacagagtatcccatggtcctcgagtatcgacctcgcatcgacttcggataa
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integrated database retrieval system
