Tachysurus vachellii: 132855004
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Entry
132855004 CDS
T09596
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tvc04121
]
132855004
Ubiquitin system [BR:
tvc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
132855004
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_6
zf-RING_5
zf-RING_2
zf-RING_10
Zn_ribbon_SprT
U-box
TMA7
DUF4407
Motif
Other DBs
NCBI-GeneID:
132855004
NCBI-ProteinID:
XP_060739688
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Position
12:2657391..2660274
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AA seq
558 aa
AA seq
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MAEASISVDQDQFICSVCLDLLKDPVTLSCGHSFCKVCINGCWDQEDQKDVYSCPQCRDT
FTPRPVLRRNNMLAEVVEKLKKKTEVQAASPDHCYNGPGDVECDFCTGRKHKAVKSCLVC
VASFCETHLKPHYQVPSWKKHKLVEASGNLQDKICSEHDEVLKIFCRSDQSFICYLCMTD
EHKSHDTVSVKAYRTEKENELQEEQLKFQQRLQEKQKKVQELKQAVNTIKLSTQTAVEDN
ERIFTEMISFMEIKRSEVTEMIRAQEKAELSRAERLLEQLEQEIDDLQRRVTEMEKLSHT
HDDIHFLQSFQSLLVSSGRDDTSSITVSQHLSFDGVKKSLSDLKKRLVEIFQEEFINIPG
RAAELQIILPSEPKSRDDFLHYFCSLTLDPNTAHRFLILSEKNKVVTDSRKHQPYSEHPE
RFVDYSQVLCKESVCGRCYWEVEWSSKDCVYIAVSYKDISRKGRGNEGWFGGNNKSWGLR
CSPSFLSFRHNNINTDLRVPSSSRIGVYVDHSAGTLSFYSVSDTMKLLHRVHTTFTQPLY
AGFWLRSYETFVKLCDPK
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggcgagtatttcagtagatcaggatcagttcatctgttcagtgtgtctggat
ctcctgaaggatccggtgactctctcctgtggtcacagtttctgtaaggtgtgtattaat
ggctgctgggatcaggaggatcagaaggacgtctacagctgtcctcagtgcagagacact
ttcacaccaaggcctgttctacgcagaaacaacatgctggctgaagtggtggagaaactg
aagaagaagactgaagttcaagctgcttctcctgatcactgttacaatggacctggagat
gtggagtgtgatttctgcaccgggagaaaacacaaagccgtcaagtcctgtctggtgtgt
gtggcttcgttttgtgaaactcatctcaaacctcactatcaagttccttcatggaaaaag
cacaagttagtcgaagcttctggaaatctacaagacaagatctgctctgaacatgatgaa
gtgttgaagatcttctgtcgttctgaccaaagcttcatctgttatttgtgtatgacggat
gaacataaaagccacgacaccgtctcagttaaagcttacagaactgagaaagagaatgag
ctacaggaggagcagctgaaattccagcagagactccaggagaagcagaagaaggtgcag
gagctgaaacaggctgtgaacactataaagctcagtacacagacagcagtggaggacaat
gagaggatctttactgagatgatcagcttcatggagataaagcgctcggaggtgacggag
atgatcagagctcaggagaaggctgaactgagtcgagctgaacgactcctggagcaactg
gagcaggagattgatgatcttcagaggagagtcactgagatggagaagctttcacataca
cacgatgacatccatttcctccagagtttccagtctcttcttgtctcttctggacgtgac
gacacatccagcatcactgtcagtcaacatctctcatttgatggagtgaagaaatctctc
tctgacctgaaaaagagacttgtggaaatcttccaggaggaattcatcaacatccctgga
cgtgctgcagaacttcagataattttaccctcagaaccaaagagtagagatgattttctg
cactatttctgttctctgactctggatccaaacacggcgcaccgtttcctcattctgtct
gagaagaacaaagtggtgacagacagtaggaaacatcagccgtactctgaacatccagag
agatttgtcgactacagtcaggtgttgtgtaaggagagtgtgtgtggacgctgttactgg
gaggtggagtggagcagtaaagattgtgtgtatatcgcagtctcatataaagacatcagc
aggaaaggtcggggtaatgagggttggtttggaggcaacaataagtcctggggtctgaga
tgttctccttctttcctgtctttccggcacaacaacattaatactgatctcagagttcca
tcatcctccagaataggagtgtatgtggatcacagtgcaggaactctgtccttctacagc
gtctctgacaccatgaagctcctccacagagtccacaccacattcactcagcctctatac
gctgggttctggctgcgcagttatgaaacatttgtaaaattatgtgatccaaaataa
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