Tachysurus vachellii: 132855574
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Entry
132855574 CDS
T09596
Symbol
syvn1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
tvc
Tachysurus vachellii
Pathway
tvc04120
Ubiquitin mediated proteolysis
tvc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
132855574 (syvn1)
04120 Ubiquitin mediated proteolysis
132855574 (syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tvc04121
]
132855574 (syvn1)
Enzymes [BR:
tvc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132855574 (syvn1)
Ubiquitin system [BR:
tvc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
132855574 (syvn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-RING-like
zf-ANAPC11
zf-HC5HC2H
FANCL_C
zf-Nse
Motif
Other DBs
NCBI-GeneID:
132855574
NCBI-ProteinID:
XP_060740606
LinkDB
All DBs
Position
13:complement(8685029..8693037)
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AA seq
610 aa
AA seq
DB search
MVRAALVTATSLALTGAVVAHAYFLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWVFHFRVLSLMVLLGVLDFLFVNHACHSIITRGASVQLVFGFEYAI
LMTMVLTTFIKYTLHTIDLQSENPWENKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLQASDNVCIICREEMVT
GAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRASQPNITPAAAAPAAPAAPANAPAP
PAANVAPGVMPQFPPGLFPFWAPFPGAVPPAAPPAAQAASSTPQTSADAIQTSGAESGAS
SSSQTGADGAAAAAAAPVPGVPGFPFSMPPPFPSAPWLPMPPPPPFMSTMPPPPPSLSTM
SEEELRELEQEGRRGLEARLQCLQNIHTLLDAAMLNIHHYLTTVASLSPPRAESNASETS
GSGKTEASTQESGSQITGSVSGATGFSQPDSTTEVEKVEEEVAEVDGEPSAAELRRRRLR
KLDTTPPLDQ
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggttcgagcagctttggtaacagccactagtctggctctcaccggagccgtggtggct
catgcctatttcctcaaacaccagttctatcctacagtggtatacctcaccaaaagcagt
ccaagcatggcagttttatatatccaggctttcgtgttggtttttcttctgggaaagttc
atgcgcaaggtgttctttggccagctgagagctgcagagatggagcacctgatcgagcgt
tcctggtatgcagtgacagagacttgcttagcctttacagtcttcagggatgacttctcc
cctcgtttcgtggcccttttcactttgctgctcttcctcaagtgctttcattggctggct
gaagacagagtggactttatggaaagaagtccaaatatctcatgggtcttccacttcaga
gttctctctctaatggtgttgctaggagtattagacttcttatttgtcaaccacgcctgc
cacagcatcatcaccagaggagcttcagtacagctagtcttcggatttgagtatgcaatt
ctgatgaccatggttctcaccaccttcattaaatacaccctacacaccatagacctccag
agtgagaacccatgggaaaataaagcagtctatatgctttacacagagctttttacagga
tttattaaggtgctgctctacatggcgttcatgaccataatgatcaaagtgcacaccttc
cccctgtttgccattcgacccatgtatctcgcaatgaggcagttcaagaaagctgtaaca
gatgccataatgtctcgacgagccattcgcaacatgaacacgctttacccagatgcaact
cctgaggacttgcaagcttccgacaatgtgtgtatcatctgtcgagaagagatggtaact
ggagccaagaagctgccttgcaaccacatctttcactctagttgccttcggtcatggttc
cagaggcagcagacatgcccgacatgccgcatggatgttctgcgagcttcacagccaaat
atcactcctgctgctgctgcccctgcagccccagcagctccagctaatgctcctgctccc
ccggctgctaatgttgctccaggtgtgatgcctcaattccccccaggccttttcccattt
tgggctcccttccctggtgcagttcctcctgctgctcctcctgctgctcaggcagcctcc
agcacgccacagaccagtgcagatgcgatccaaacatcaggggcagaatcaggagcaagt
agctcaagccagactggtgcagatggtgctgctgctgctgctgcagctcctgtgcctgga
gtgcctggcttccccttttctatgccccctccatttccatcagcaccatggttgcccatg
cctcctcctccacctttcatgtcaacgatgcctccgcccccaccatctctgtccacaatg
tcagaggaagaactgagggagttggagcaggaaggccgccgtggtctggaggccagactg
cagtgccttcagaacatccacacactgctggatgctgccatgcttaatatccaccattac
ctcacgactgtcgcttcgctcagtcctcctcgagcagagagcaacgctagtgaaacgagt
ggatcaggaaaaactgaagcttccacccaagagagtggatcacaaatcactggttctgtc
agtggagctactggattttcccaaccagattccactacagaagttgagaaggtggaggaa
gaagtggcagaggtggacggagagccaagcgctgctgaactgagacgccgccgcctacgc
aagctggacaccacaccacctctggaccaatga
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