Tachysurus vachellii: 132856428
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Entry
132856428 CDS
T09596
Symbol
usp47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tvc01002
]
132856428 (usp47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tvc04121
]
132856428 (usp47)
Enzymes [BR:
tvc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
132856428 (usp47)
Peptidases and inhibitors [BR:
tvc01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
132856428 (usp47)
Ubiquitin system [BR:
tvc04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
132856428 (usp47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
Motif
Other DBs
NCBI-GeneID:
132856428
NCBI-ProteinID:
XP_060742026
LinkDB
All DBs
Position
1:complement(37042034..37065646)
Genome browser
AA seq
1332 aa
AA seq
DB search
MEMVPSEENQLVPKENENAAEEPRVLCIVRDTTNPNTVNERLTLNLPASTTLSKLFEDVA
HKAGYVNGTFELAWANVVALAPLDQASEMSLVESGFELGKRNFLQLTDKDGEQPQIASDE
SGTADSSGLEDSSQDRFIGPLSRDGTVGCSSDYSSPSYSYSSILNKSETGYVGLVNQAMT
CYLNSLLQTLFMTPEFRNALYNWEFEESEEDPVISIPFQLQRLFVLLQTSKKRAIETTDV
TRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLINQLYQGKLKDYVRCLECGN
ESWRIDTYLDIPLVIRPFGASQAFGSVEEALQAFIQPETLDGPNQYFCERCKKKCDARKG
LRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMSPFIDLEDEKSPQTESCTD
SGAENEGSCHSDQMSNDFSTDDGVDEGICLDSTSTTERALKPKSSLTYELFSVMVHSGSA
AGGHYYACIKSFSDGQWYSFNDQHVSKITQDDIRKTYGGSSGSRGYYSSAFASSTNAYML
IYRLKDPSRNAKYLDVEDFPEHIKRLVQRERESEEQEKRQREIERNTCKIKLFCMHPVKM
VMMENKLEVHKDKTLREATEIAYKLMELEGVVPFDCCRLVKYDEFHEYLERSYEGEEDMP
MGLLLGGVKSSYMFDLLLETRRPDHVFQPYKPGEVMVKVHVVDLKSETITAPVSVRAYLN
QTITEFKQLIAQATGLYAETMRVVLERCYNDLRLLYVPNKTLKAEGFFRSNKVFVESSDS
EDHQAAFTESLLWKLLDRHGNTIRLFVSLPEQSPGSVAHRTSCPKMSVDSEDSFGGAKSS
GQCVEAILEESTEKLKNLSFQQQQQKQSSSTSESQKSSDHSDFEHLDFPQPENQLASEER
SDSDANNDRSTSSVDSDILSSSHSSDTLCNADGAPLPLANGLDSHSITSSRRSKAHEGKK
ETWDTAEEDSGTDSEYDENGKSKTQTHHLYFRAESYSQEDAAGHGANSLLVHVDKRITLA
AFKQNLEPFVGVASTQFKVFRVYANNQEFESVRLNETLSSFSDDNKITIRLGRALKKGEY
RVKVYQLLVNESEPCRFLLDTVFAKGMTVRQSKEVLLPQLQEQCKLELSIDRFRLRKKTW
KNPGTVFLEYHVYEEDINISSNLEVFLEVLDEPERMKSMSQLAVLSRRWCPAQMKLEPFR
EVVLESSSVDELKEKLSEISQIPLENLEFAKGRGTFPCDISVLEIHQDLDWNPKVSTLNV
WPLYICDDGAVVFYRDRTEEPMELSEEERNELMKKESSRMLKTGHRVSYSPRKEKALKIY
LDGGPSKDPGLD
NT seq
3999 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggtgcccagcgaggaaaaccagctcgtaccaaaagagaacgagaacgctgcc
gaggaaccccgagtgttgtgtattgttcgggacaccaccaaccccaatacagtcaacgag
agactgactctcaacctcccagcttccaccaccctctccaagctcttcgaagacgtcgct
cacaaagccggctacgtgaatggcacctttgagctggcatgggccaacgtggtggctttg
gctccgctggaccaggccagtgagatgtctctggtggagtctgggtttgagctaggaaag
aggaacttcctgcagctcacagacaaggatggcgagcagcctcagatagcttctgatgag
tccggcacagcagacagcagcgggctggaggacagttctcaggaccgcttcattggaccc
ctgtcccgtgatggtacagtaggatgtagcagtgactacagcagcccaagttactcctac
tcctccatactcaacaagtctgaaacaggatatgtgggtttggtcaatcaggccatgact
tgctatctgaacagtttactccagaccctgttcatgacgccagagtttagaaatgctctc
tacaattgggagtttgaggagtctgaggaagatccggtcatcagtatccccttccagctg
caaaggctgtttgtgctgctgcagaccagcaagaaacgagccatagagaccacggacgtg
actcggagcttcggctgggacagcagtgaagcctggcaacagcacgacgtccaggaactt
tgccgggtcatgttcgacgccttagaacagaagtggaaacaaacggagcaggctgatctc
ataaatcagctgtaccagggcaaactgaaggactatgtgcgctgtctggagtgtggcaat
gaaagctggagaatcgacacctacttggacatccctttggtcatcaggcctttcggagcc
agtcaggcttttggcagtgtggaagaagcactgcaggccttcatccagcctgagactttg
gatggtcccaaccagtacttctgcgagcgctgcaagaagaaatgcgatgcacgcaagggt
ttgcggttcctgcactttccctacctgctgacgttgcagctgaaacgttttgacttcgac
tacaccactatgcacagaatcaagctcaacgaccgcatgaccttccctgaggaacttgac
atgagcccctttattgacctcgaggacgagaaatctcctcagacagagagctgcactgac
agcggggcagagaacgaaggcagttgccacagtgaccagatgagcaacgacttctccacg
gatgacggtgtggacgagggcatctgcctggacagtacaagcaccactgagcgggcactt
aagccaaagagttcattgacctacgaacttttctctgtaatggtgcattctgggagtgct
gctggtggacactactatgcctgcatcaagtctttcagcgatggtcagtggtacagcttc
aatgaccagcacgtcagcaagatcacgcaggatgacatcaggaagacatatggtggttcc
tcagggagcagaggctattactccagtgcctttgccagctccacaaacgcctacatgctc
atatatagactgaaagatccctcaaggaatgcaaagtacctcgacgtcgaagacttccca
gagcacataaaacgtctcgttcagagggaacgagagtccgaggaacaggagaagagacaa
agggaaatcgaacgcaatacttgcaagatcaagctcttctgcatgcatcctgtcaagatg
gtcatgatggagaacaagctggaggttcacaaggacaaaacactccgagaggccacagaa
atagcatataagctgatggagctcgagggcgtagttccatttgactgctgtcgcttggtg
aagtatgacgaatttcatgaatatctggagcgctcatacgagggtgaggaggacatgccc
atggggctgctactgggtggggttaaatcctcctacatgttcgatttgctactcgagacc
cggcgacccgaccatgtgttccagccttataaacctggagaggtgatggtgaaggtccat
gtggtggatctgaagagtgagaccatcactgctcctgtcagcgtcagggcatacctgaac
caaaccattacagagtttaagcaactcattgcacaagccactggtctgtacgcagaaacc
atgcgcgttgtcctggagcgctgctataatgacctccggctactgtatgttcccaacaag
acactgaaagctgagggtttcttcaggagtaacaaggtttttgtggagagctcagactca
gaggaccaccaggccgccttcaccgaatcactcctgtggaaacttctggaccgtcatggc
aacacaatcagactgtttgtttcactccctgagcagtcaccaggctccgtggcccacaga
actagttgccccaaaatgagtgttgactcggaggactcgtttgggggggctaaaagcagc
ggccagtgcgtagaggccatactggaggagagcacagagaagttaaagaacctttccttt
caacagcagcagcagaagcaatcctccagcaccagcgagagccagaagagctcggaccac
agtgattttgagcacctagatttcccacagcctgaaaaccagctggcttctgaggaacgc
tccgactcggatgccaacaacgatcgcagcaccagctccgtggactccgacatcctgagt
tcaagtcacagcagtgacactctgtgcaatgccgatggcgcacctctgcctctggctaac
ggcctcgactcgcacagcatcaccagcagccgccgatccaaagcccacgagggcaagaag
gagacgtgggacacagccgaggaagactcgggcactgatagcgaatacgacgagaatggc
aagagtaaaactcagacacatcacctgtacttcagagcggaatcgtattctcaggaggat
gctgccggacatggagcgaacagtttacttgttcatgttgataaaaggatcacactggca
gcattcaagcagaaccttgagccatttgttggagtagcctctacccagttcaaggtcttc
cgagtctacgccaacaaccaagagtttgagagcgtacgactcaacgagaccctttcttct
ttctcggatgacaacaagatcaccattcggttaggacgagccctaaagaaaggggaatac
agggtaaaggtgtatcagctgttagtcaatgaatcagagccttgtagattcttgttggat
accgtgttcgctaagggcatgaccgtgaggcagtccaaagaggtgttactgccccagctc
caagaacagtgcaaactggagcttagcatagacaggtttcgactcaggaagaagacatgg
aaaaacccaggcacggtgtttctcgagtatcacgtgtacgaggaggacataaatatctct
agtaatttggaagtcttccttgaagtacttgacgaaccggagcggatgaagtccatgtct
cagttggccgtgctgtcacggcgctggtgtccggctcagatgaagctggagcccttccgg
gaggtggtgctggagagcagcagtgtagatgaactcaaggaaaagctcagtgaaataagt
cagattcctctcgagaacttggagttcgcaaagggacgaggaacatttccttgtgacata
tctgtgttggagatccatcaggatctggactggaacccaaaagtttccacacttaacgtc
tggccgctctacatctgcgacgatggtgcagtggtgttttacagggacaggactgaggag
cccatggaactctcagaagaagagcgcaacgaactgatgaagaaagagagcagtcggatg
ctgaagacgggccaccgggtcagttattctccccgcaaggaaaaagctctcaagatctac
ctagacggagggccttcgaaagacccgggcctagactga
DBGET
integrated database retrieval system
