Tachysurus vachellii: 132857710
Help
Entry
132857710 CDS
T09596
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like isoform X1
KO
K12006
tripartite motif-containing protein 16
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tvc04121
]
132857710
Ubiquitin system [BR:
tvc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
132857710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-RING_6
PRP1_N
MIP-T3
DUF6591
Mt_ATP-synt_D
Motif
Other DBs
NCBI-GeneID:
132857710
NCBI-ProteinID:
XP_060743672
LinkDB
All DBs
Position
15:complement(21465096..21468356)
Genome browser
AA seq
554 aa
AA seq
DB search
MAESSISVDQDQFSCPVCLDLLRVPVTLHCGHSFCKVCINGCWDQEDVKGVYSCPQCRET
FTPRPVLHRNNMLAEVVEKLKKTELQAASAHCYAGPGDVECDSCTGRKHKAVKSCLVCQA
SFCEYHLKPHYQSPAFKKHKLVEACAELQEKICSEHDKLMEVYCRTDQSLICYLCTMKKH
KGHDTVSTETERTKKQNELKEDQIKSQQRIQEKQKKVQELKQTVDIIKVGSQAAVDDSER
IFTELISSMEKKRSEVTELIRAQEKAEVSRAERLLNQLEQEIADLKRRVTEMEQLSHTHD
DIHFLQSFPSLCVSPGCDDSLSFTVNQHLSFDGVRKSLSGLKKRVEQICEEEFNKIRPQA
AAVQMILPSKPKNREDFLQYFCYLTLDPNTAHHQLILSEKNRVVTRSEKKQRYSDHPERF
DSWTQVLCKESVCGRCYWEVEWSGDVFISVSYKEISRKGQGKESLFGYNSQSWSLECSSS
SVFFYHNNIETELRGPSSSRIGVYVDHSAGTLSFYSVSDTMRLLHSVHTTFTQPLYAGFW
IRSSVSSVRFCDRK
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggcagagtccagtatttcagtagatcaggatcagttcagctgtccagtgtgtctggat
ctcctgagggttccagtgactctccattgtggtcacagtttctgtaaggtgtgtattaat
ggctgctgggatcaggaggatgtgaagggcgtctacagctgtcctcagtgtagagagact
ttcactccaaggcctgttctacacaggaacaacatgctggctgaagtggtggagaaactg
aagaagactgaactccaagctgcttctgctcactgttacgctggacctggagatgtggag
tgtgattcctgcacagggagaaaacacaaagctgtcaagtcctgtctggtttgtcaggcc
tccttttgtgaatatcatcttaaacctcactatcagtctcctgcttttaagaagcacaag
ttagttgaagcctgtgcagagctccaagagaagatctgctctgaacatgacaaactgatg
gaggtctactgtcgtactgaccaaagcctcatctgttacttgtgtacgatgaaaaaacac
aaaggtcatgatacagtttcaactgaaacagaaagaactaaaaaacagaatgagttaaag
gaggatcagataaaatcccagcagaggatccaggagaagcagaagaaggtgcaggagctg
aaacagactgtggacattattaaggtgggttcacaggcagcagtagatgacagtgagagg
atctttactgaactgatcagctccatggagaaaaagcgctcggaggtgacggagctgatc
agagctcaggagaaagctgaagtgagtcgagctgaacgactcctgaatcaactggagcag
gagattgctgatcttaagaggagagtcactgagatggagcagctttcacacacacacgat
gacatccacttcctccagagtttcccgtctctctgtgtttctcctggatgtgacgactca
ctcagcttcactgtcaatcaacatctctcatttgatggagtgaggaaatctctctcaggt
ctgaaaaaacgagtcgaacaaatctgtgaggaggaattcaacaaaatcagaccacaagct
gcagcagttcagatgattttaccttcaaaaccaaagaacagagaagattttctgcagtat
ttctgttatctgactctggatccaaacacagcacatcatcaactcattctgtctgagaag
aacagagtggtgacacggagtgagaaaaaacagcgatactctgatcatccagagagattt
gactcctggactcaggtgttgtgtaaggagagtgtgtgtggacgctgttactgggaggtg
gagtggagcggtgatgtgttcatatcagtgtcatataaagagatcagcagaaaaggacag
ggtaaagagagtttgtttggatacaacagtcagtcctggagtctggagtgttcttcttcc
tctgtctttttctaccacaacaacattgagactgagctccgaggtccatcatcctccaga
ataggagtgtatgtggatcacagtgcaggaactctgtccttctacagcgtctctgacacc
atgaggctcctccacagtgtccacaccacattcactcagcctctatacgctggattctgg
atacggagttctgtctcatctgtgaggttttgtgatagaaaatga
DBGET
integrated database retrieval system
