Tachysurus vachellii: 132857808
Help
Entry
132857808 CDS
T09596
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like isoform X1
KO
K12006
tripartite motif-containing protein 16
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tvc04121
]
132857808
Ubiquitin system [BR:
tvc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
132857808
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4_2
zf-C3HC4
SPRY
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-RING_10
U-box
zf-Nse
ATP-cone
eIF3_subunit
Prok-RING_4
AAA_24
Zn_ribbon_SprT
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
132857808
NCBI-ProteinID:
XP_060743853
LinkDB
All DBs
Position
15:complement(21861506..21869308)
Genome browser
AA seq
553 aa
AA seq
DB search
MAEAGMSTDQDRFSCPVCLELLKDPVTTPCGHNFCKMCINGFWDKEDQKGIYSCPQCRET
FTKRPVLRRNNMLAEVVEELKKTELQAVSPARCYAGPDVECDSCTGRKRKALRTCLVCLA
SYCEDHLQPHYQSPAFKKHKLVEPCAELQEKICSEHDKLLGIYCHTDQSFICYLCTLEEH
KGHNTVSTEAERTEKQNELKKEQMKSQQRIQEKQKKVKELKQTVDIIKRRSQEAAFDSER
IFNELISSMEKKRLEVMELIRAQEKADLSRAEQLLNQLEQEIADLNRKVTEMEQLSHTHN
DIHFLQSFPSLCVSPGCDDSLSFTVNQHLSFDGVRKSLSDLKKQVEQICEKKVKNVCLEA
ATIQMILPSELKSREDFLQYFRYLTLDPNTAHRELILSEKNRVVTWSRTKQQYSDHPERF
DSCPQVLCKESVCGRCYWEVERRGVVSISVSYKISRKVEGNECLFGYNNQSWSLRCSSSS
VFFMHNNIETDLQGPVTSRIGVYVDHSAGTLSFYSVSDVMRLLHRVHTTFTQPLYPGFWI
RSYDSHISLCDPK
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggctggtatgtcgacagatcaggatcggttcagctgtccagtgtgtctggaa
ctcctaaaggatccagtgactactccctgtggccacaatttctgtaagatgtgtattaat
ggcttctgggataaagaagatcagaagggcatctacagctgtcctcagtgtagagagact
ttcactaaaaggcctgttctacgcaggaacaacatgctggctgaagtggtggaggagctg
aagaagactgaactccaagctgtttctcctgctcgctgttacgctggacctgatgtggaa
tgtgattcttgcactgggagaaaacgcaaagctctcaggacatgtctggtttgtttggcc
tcctattgtgaagatcatcttcaacctcactatcagtctcctgccttcaagaagcacaag
ttggttgaaccctgtgcagagctccaagagaagatctgctctgaacatgacaaactactg
gggatctactgtcatactgaccaaagcttcatctgttacttgtgtacattagaagaacac
aaaggtcacaatactgtctcaactgaagcagaaagaactgaaaaacagaatgagctaaag
aaggagcagatgaaatcccaacagaggatccaggaaaagcaaaagaaggtgaaggagctg
aaacagactgtagacatcattaagaggcgttcacaggaagcagcatttgacagtgagagg
attttcaatgagctgatcagctctatggagaaaaagcgcttggaggtgatggagctgatc
agagctcaggagaaagctgatctgagtcgagctgaacaactcctgaatcaactggagcag
gagattgctgatcttaataggaaagtcactgagatggagcagctttcacacacacacaat
gacatccacttcctccagagtttcccgtctctctgtgtttctcctggatgtgacgactca
ctcagcttcactgtcaatcaacatctctcatttgatggagtgaggaaatctctctcagat
ctgaaaaaacaagtcgagcaaatctgtgagaagaaagtcaaaaacgtctgtctagaagct
gcaacaatccagatgattttaccctcagaactaaagagcagagaagattttttgcagtat
ttccgttatctgactctggatccaaacacagcacatcgtgagctaattctgtctgagaag
aacagagttgtgacatggagtaggacaaaacaacaatactctgatcatccagagagattt
gactcttgtcctcaggtgttgtgtaaggagagtgtgtgtggacgctgttactgggaggtg
gagaggagaggtgttgtgtccatatcagtctcatataagataagcaggaaagtagaaggt
aatgagtgtttgtttggatacaacaatcagtcttggagtctgcggtgttcttcttcctct
gtctttttcatgcacaacaacattgagactgacctccaaggtccagtgacctccagaata
ggagtgtatgtggatcacagtgcaggaactctgtccttctacagcgtctctgatgtgatg
aggctacttcacagagtccacaccacattcactcagccgctataccctggattctggata
cggagctatgattcacatatttctttgtgtgatccaaaataa
DBGET
integrated database retrieval system
