Tachysurus vachellii: 132861408
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Entry
132861408 CDS
T09596
Symbol
rbfox1
Name
(RefSeq) RNA binding protein fox-1 homolog 1
KO
K14946
RNA binding protein fox-1
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tvc03041
]
132861408 (rbfox1)
Spliceosome [BR:
tvc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
132861408 (rbfox1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
RRM_8
Motif
Other DBs
NCBI-GeneID:
132861408
NCBI-ProteinID:
XP_060748901
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All DBs
Position
18:20893675..20933654
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AA seq
371 aa
AA seq
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MEEKGSKMVEEGNQDTPAPPEPMAQPYPSAQFAPPQNGLPTEYPASHPHPTPEYPGTSAV
PEHTLNMYPTAHTHSEPSGDSSAHTVSGTATQTDDAAQTDSQQQTQTSESTENKTQPKRL
HVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFESSADADRAREKLHGT
VVEGRKIEVNNATARVMTNKKTVNPYANGWKLNPVVGAVYSPEFYAVPGFPYPAATAAAA
YRGAHLRGRGRTVYNTFRAAAPPPHIPAYGGVVYQDGFYGADIYGGYAAYRYAQPATAAA
AAYSDSYGRVYAADPYNHTLAPAATYSVGAMNAFAPLTDAKTRSHADDVGLVLSSLQASI
YRGGYSRFAPY
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaaaagggagcaagatggtggaagagggtaatcaggacacccccgccccacca
gagcccatggcccagccgtacccgtctgcccagtttgccccccctcagaacggcctgccc
actgagtacccagcgtctcacccccaccccacccccgagtacccgggcacaagtgctgta
cctgagcacacgctgaacatgtatcctactgcgcacacacacagtgagcccagcggcgac
tccagcgcacacaccgtctccggcacagccacgcagacagacgacgcagcacagacagac
agccagcaacagacgcagacctccgaaagcacggaaaacaagacgcagccgaagcgactg
cacgtctccaacattcccttcaggttcagagatccagacctcaggcaaatgttcggccaa
tttggtaaaatcttagatgttgagatcatttttaatgagaggggctctaagggttttggt
ttcgtaactttcgaaagtagtgctgatgcggacagggcgagggagaaattacacggcacg
gtggtagaaggccgtaaaatagaggtgaacaatgcgacagcacgagtaatgacaaacaaa
aagacagtcaacccttatgcaaatggctggaagttgaatcctgtagtaggtgcagtctac
agcccagagttctatgcagtgccaggcttcccgtacccagctgccacggcggctgcagcc
tacagaggggcacacttaagagggagaggacgcaccgtgtacaacacgtttagagcagca
gctcctccaccacacatcccagcgtacggaggtgtcgtgtaccaggatggattttatggt
gcagatatttatggcggttacgctgcctaccgatacgcccagcctgccacagctgcagct
gccgcctacagtgacagttacggacgagtttatgctgccgacccctacaaccacacactt
gctccagcagccacatacagcgttggtgccatgaacgctttcgcacccctgaccgatgcc
aagaccaggagccatgcggacgacgtgggtctcgttctttcttcgctgcaggctagtata
taccgaggcggatacagccgtttcgctccatactaa
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