Tachysurus vachellii: 132861442
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Entry
132861442 CDS
T09596
Symbol
dhx58
Name
(RefSeq) probable ATP-dependent RNA helicase DHX58
KO
K12649
ATP-dependent RNA helicase DHX58 [EC:
5.6.2.6
]
Organism
tvc
Tachysurus vachellii
Pathway
tvc04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
132861442 (dhx58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
tvc04054
]
132861442 (dhx58)
Enzymes [BR:
tvc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
132861442 (dhx58)
Pattern recognition receptors [BR:
tvc04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
132861442 (dhx58)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIG-I_C-RD
RIG-I_C
ResIII
Helicase_C
DEAD
SWI2_SNF2
AAA_19
AAA_11
OmdA
Hydantoinase_B
AAA_22
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
132861442
NCBI-ProteinID:
XP_060748950
LinkDB
All DBs
Position
18:complement(5589364..5595209)
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AA seq
678 aa
AA seq
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MEEISLRPYQREVVQAALRKENSIIWLPTGGGKTRAAVYVAKRHLETHPDAKVAVLVNKV
HLVDQHFQKEFRPYLGSSVKMVQISGDSSEKDFFGCVVRDSSLVICTAQILENALINTEE
NKHVELTDFTLLIIDECHHTHKDGVYNKIMARYVEKKLKGVRDLPQILGLTASPGTGGAR
NLKGAIEHVLEICANLDSVIVSAETNMPALKEAVPRPTKNYDIVDARLCDPFAHHLKMMM
KLIHEFMMLDPKFTLREMGTQEYEADVVALEKKGSQEKNRLLAKCAIHLRKFNDALLIND
TVRMVDALRLLEDFYETQNRNVLDFTDEYLTALFTENRVELKELASKEINENPKLERLQR
TLLDQFQDKNSRGIIFAKTREITRCLYDWVRTNPQLRCAKIRAANLVGAGTGATHMTQRE
QKDTIQTFRDGDLNLLISTSVAEEGLDIPECNVVIRYGLLTNEIAQQQASGRARAKDSVY
SVVAQAGGREMRREKTNEYLEELTSQAIAHVQRMPHREFRKKISELQQEALMARILEAKQ
SEQRRKRYDPAEVTLDCRGCYKRVVRGSDMRLVNDTQHVNVNPDFERLYKVGGQVYLERT
FEDWEPGRTISCATCGQAWGMEVKLKNVVLPCLRIDGFVMTTPQKSSPVKQWKKVEFKVE
EFDFVQYVKKRYPDLLDD
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggaggagatctcgctgaggccgtaccaacgtgaggtggtccaggcggctctgagaaag
gagaacagcatcatctggcttcctacaggtggaggaaagaccagagctgctgtctacgtg
gccaaaaggcacctggagactcatcccgatgctaaagtggctgttcttgtcaacaaggtg
cacctggtggatcaacactttcagaaagagtttcggccttacctgggtagctccgtgaag
atggtgcagatcagcggggacagtagcgagaaggattttttcggttgcgtggtcagagac
tcgagcctggtcatctgtacagctcagatcctggagaatgctttaataaacacagaggag
aataagcatgtggagctcacagacttcacactgctgatcatcgacgagtgccatcacact
cataaggacggagtgtataataaaatcatggcacgctatgtggagaaaaagcttaaaggg
gtgagagatctacctcagatcctgggtcttacagcttcaccgggtaccggaggagccaga
aatctgaagggtgccatcgaacacgtcctggagatctgtgcaaacctggactctgttatc
gtgtcagctgaaactaatatgccagcgcttaaagaggcagttcccagacctacaaagaac
tatgacattgtggatgcgagactttgtgacccatttgctcatcatctgaagatgatgatg
aagctgattcacgagtttatgatgttagacccaaagttcactctgcgggagatgggcacc
caggagtatgaagctgacgtggtagcgctggaaaagaaaggttcacaggagaagaacagg
ttattggccaagtgtgcaatccacctgcggaaattcaacgacgctctgctcattaacgac
actgtacgcatggtggacgctctgaggcttctagaggacttttatgaaacccagaacaga
aacgtgctggacttcactgatgagtatctcacagcactctttactgagaatagagtggag
ctaaaggaacttgcgtccaaagagatcaatgagaatcccaaactggaacgactgcagcgc
accctactggaccagttccaagacaagaactcacgtggtatcatttttgctaaaacccgt
gagatcacacgctgcctgtacgactgggtgcgtacgaacccgcagctacggtgcgctaag
atccgtgctgctaacctggtcggcgctggaaccggagccacccacatgacacagagagag
caaaaagacaccattcagacatttcgagacggagacctcaacctcctcatctccaccagc
gtggccgaggaaggcctcgacatcccagaatgtaacgtggtgatccgatacgggcttctg
accaatgagatcgcacagcaacaggccagtgggcgggccagagccaaagacagcgtctat
tcagttgtggcacaagcaggtgggcgagagatgcgtagagagaaaaccaacgagtatctg
gaggagttaactagccaggccatcgctcacgtgcagcgcatgccgcacagggaatttcgc
aaaaagatatccgagctgcagcaggaagcactgatggctcgcatcctggaagccaaacag
agcgagcagagaaggaagcgctatgatcctgctgaggtgacgttggactgccgtggctgc
tacaaacgtgtcgtccgtggaagcgacatgagactcgtgaacgacacgcagcacgtcaac
gtcaaccccgatttcgagaggttgtacaaggtgggaggtcaggtttatctggaacggaca
ttcgaagactgggagccgggtcgaaccatcagctgtgctacatgtggacaggcttggggg
atggaggtgaagttaaagaacgtggtgttaccgtgtctaagaatagacggctttgtgatg
acgacacctcagaaaagcagcccagttaaacaatggaagaaagtagagttcaaggtggag
gagtttgactttgttcagtatgtgaaaaagcgctaccccgacctgttggatgactga
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