Tachysurus vachellii: 132863276
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Entry
132863276 CDS
T09596
Symbol
sim2
Name
(RefSeq) single-minded homolog 2
KO
K09100
single-minded
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tvc03000
]
132863276 (sim2)
Transcription factors [BR:
tvc03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
132863276 (sim2)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_11
PAS
SIM_C
PAS_9
HLH
PAS_4
Per3-like_PAS-A
Motif
Other DBs
NCBI-GeneID:
132863276
NCBI-ProteinID:
XP_060751987
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Position
20:complement(9712815..9726717)
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AA seq
734 aa
AA seq
DB search
MKEKSKNAAKTRREKENGEFYELAKLLPLPSAITSQLDKASIIRLTSSYLKMRAVFPDGV
GDAWGEAARCSPLDSVAKELGAHLLQTLDGFVFVVASDGKIMYISETASVHLGLSQVELT
GNSIFEYIHPSDHDEMTAVLSAHQPIHPHFLPEYEMERSFFLRMKCVLAKRNAGLTCGGY
KVIHCSGYLKIRQYVMEVCLYDSCYQIVGLVAVGHSLPPSGITEIKLHSNMFMFRASLDL
KLIFLDSRVAELTGYEPQDLIEKTLYQHVHGCDVFHLRYAHHLLLVKGQVTTKYYRMLSK
HGGWVWVQSYATIVHNSRSSRPHCIVSVNYVLTDIEYKDLQLSQEQLRARPTLSYKSSNS
PPQDLRKQFKAKTARVKTKPKTSPYPQFSMSSDKLESPPGGSWKSSPPCSLSASQEKSPV
SLSNPEQGEMLPYSVPLTYSCAQAHTRLREDCSKLQPVTGSPEQVECRLLSVAAVQRDGH
WGNTGSPKPPLNPHTLKPSLHNGSPNTSSYNNSYADCGRRFCSDSLHENFSSCSSSSRLS
SRFKEEPYEHLSISHSRPQNQLHNPTQGSAEYRKLSKDPAERAEMALPCRLLNKSTYDQP
RVCHGLQNLSQNIPMQMMLEQKRRLHMTETTYNPQTQQHSARGHCDASRAEERTVLKGQS
SYVSLNLHHVLAKHSSFPAVPYSLGHLADSYSYRTEELNPYLYRAQSPASRSSPENHGQI
QHYIGTSVIISNER
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaaaagtctaagaatgcggcgaaaacgagacgagagaaagaaaatggagagttt
tacgaacttgccaagctcctgcctttgccctcggccatcacctcacaattggacaaggcc
tccatcatcagactgacctccagctacctgaagatgagggccgtgtttcccgacggtgtg
ggggatgcatggggcgaggcggcacgctgcagtccgctggactctgtggccaaagagctc
ggagcgcacctgctgcagactctggatggctttgtgtttgttgtcgcctctgatggtaaa
atcatgtatatctctgagacggcctcagttcacctcggcttatcacaggttgagttgaca
ggtaacagcatattcgaatacatccacccttctgaccacgacgagatgactgcagtgctg
agcgctcaccagccaattcacccgcactttctaccagagtacgagatggagcgatccttc
ttcctcaggatgaagtgtgtattagctaagcggaacgcagggctgacttgcggtggttac
aaggtgattcactgcagcggttatctaaagatccgccagtacgtgatggaggtgtgtctc
tacgattcctgctatcagatcgtgggtctggtggctgtgggtcactctctgcctcccagc
ggcatcaccgagatcaaactccatagcaacatgttcatgttccgtgccagcttagacctc
aagctcatcttcctcgacagcagagtggctgagttgaccggttatgagccacaggacctg
atagagaaaaccctgtatcaacatgtccatggctgtgacgtgttccacctgagatacgca
caccacttactactggtgaaagggcaggtcaccacaaagtattaccgcatgttgtccaag
catggtggctgggtctgggtccaaagctacgccaccattgtgcacaacagccgatcttct
cggccgcactgcatcgttagtgtcaactacgttctcacagatattgagtataaggacttg
cagttgtctcaggagcagctcagggccagaccaaccttgtcctataaaagctccaactct
cccccacaggacttgcgcaaacagttcaaagccaaaacagccagagtcaaaaccaaaccc
aaaacttccccataccctcagttctccatgtcctctgataagttggaatctcctccagga
ggtagctggaagtcgagtcctccatgcagcctctcggccagccaggaaaagagtccggtc
tcactgtccaaccccgaacagggtgagatgctgccctatagtgtgccgctgacgtactca
tgcgcacaagctcacacacgcctccgtgaggactgcagtaagctgcagccagtgacgggt
tcccccgagcaggttgagtgtcggctcctctcagtggcggcagtccaaagagacggacac
tggggcaacacaggctcccccaaaccccctttaaatccacacacactcaaaccttcttta
cacaacggcagccccaatacctcatcatataacaacagttatgcagattgtggcaggagg
ttttgcagtgattccctccatgaaaactttagcagctgctcgtcttcctccagacttagc
agccgcttcaaagaggagccatacgaacatctctccatcagccatagcaggccacagaac
cagcttcacaatcctacacaaggaagtgctgagtacaggaaactcagtaaagacccggca
gagagggccgagatggcactgccatgccggctgttgaataagagcacctatgatcagcca
cgtgtctgccatggactccagaaccttagccagaacattcccatgcagatgatgttggaa
cagaaaaggagattgcacatgactgagacaacgtacaacccccagacgcagcagcattca
gctcgtgggcactgcgatgcctccagggctgaggagaggacagtactgaagggacaatct
tcatatgtctctttgaaccttcaccacgttctggctaagcacagctccttcccagctgtg
ccgtattcactcggacacctggcggacagctacagctaccgtacggaggaactcaatccc
tatttgtacagggcccagagcccggcttcccgctcttcccccgagaaccatggccaaatt
cagcactacatcggcacctctgtcatcatcagcaacgagaggtga
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