Thalassomonas viridans: SG34_003805
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Entry
SG34_003805 CDS
T08831
Name
(GenBank) efflux RND transporter permease subunit
Organism
tvd
Thalassomonas viridans
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
Motif
Other DBs
NCBI-ProteinID:
WDE06063
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Position
865739..868873
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AA seq
1044 aa
AA seq
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MTARSEQLTGIIAWFTRNSVAANLLMMFILIAGVFSYQQLNKKTFPEFNPNSIQVRVFHL
GAAPEEVEQGVILKVEEALEDIEGIKRITSTAQEGLGTVNIELQSGYSISEKLDEVQMQV
DAITTFPEQTEKPIITKVEFKSQVMWLSVSGTMDRRTRQVMTQDIRDEIMALPSVNIADI
VGSRDYEISIEVSEEKLQKYGLTFSAVSQAVRKSSVDLPGGTIKTRGGDILLRTQGQAYT
GKEYGSLVLTTKPDGTRLVLSDVANVVDGFVEQDDFAKFNGEHTSSIMIQSTGDQNDLAI
AEEVKAYVEQKNKSLPAGAKLTMWGDSSYYLSERLDMMITNLTMGASLVFLVLTLFLRIK
IAFWVMIGIPISFFGAFIMMPLLGDWSVSINMISLFAFIMVLGIVVDDAIVIGESAYSEI
QNYGHSTDNVIRGTLRVAMPATFGVLTTIAAFAPLLTIEATFAAFFRAIALVVSFCLIFS
LIESKWILPAHLAHMRYRPLTWENANVIERMQMAFKEKLEHFIHHRYQDWLERALHARYN
TMAVFVAILILSLSLITGGLVKMEVFPSIPSDFIQGKIVMVNGSSAHDRNRAIDKVDRAA
QAIVAENPHLGINFIKHTMVFTQGNTQATFILELVKPDQRELSAYDIEKLWRERIGEIPG
AKELRFYAGTNAGGDAALEFQFNGSNDRELEAAAQALQDKLKEYDGVYDIRNSFSRGSQE
IKLDIKPEAEILGLTLTDLARQVRQAFYGEEAQRIQRGRDELKVMVRYPKEQRLSVFDLE
DMWIRTPDGKEVPFYQVADISIGQGFSTITRVNQKRAITISADIDSEKVESRKIVAEMNE
SGIPDILSNYPSVRYGMEGASKEQADFLRQLAMAGVGALFLIYCLIAIPTKSYVQPLVIM
SVIPFGIIGAIAGHWLLGKTINMMSIYGFIALSGVVVNDSLILVDFINKGKTSGRRMVDI
VMQAGTQRFRAILLTSLTTFFGVLPLYFETSLQAQFIIPMAISLGFGIVFATVITLFLIP
ALYLIKEDLQGLFSRERAQEIIRE
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcccgcagcgagcaattaaccggcatcatcgcctggtttacccgcaacagcgtc
gccgccaatttattaatgatgtttattttgattgccggtgttttttcctatcagcagtta
aacaaaaaaacctttccggaatttaatcccaacagtatccaggtccgggtgttccacctg
ggggcggcgcctgaagaagtcgagcagggggtgatcctcaaggttgaggaagctcttgaa
gatatcgaaggcatcaagcgcatcacctctacggcgcaggaagggctgggcaccgtcaat
attgaactccagtcggggtattcgatttcggagaagcttgatgaagtgcagatgcaggtg
gatgccatcaccacttttccggaacagaccgaaaaacctattattactaaggttgaattc
aagagccaggtgatgtggctttctgtcagcggtactatggacaggcgcacccgtcaggtg
atgacacaggatatccgcgatgaaatcatggcgctgcccagtgtcaatatcgccgatatc
gtcggcagccgggattatgagatcagcatcgaagtatcggaagagaaactgcaaaagtac
ggcctgactttttccgccgtcagccaggcggtgagaaagtcttccgtggacctgccggga
ggcaccatcaaaacccggggaggcgatattttactgcgcactcaggggcaggcctatacc
gggaaagaatacggctccctggtgctgaccactaaacccgacggcacccggttggtgctt
tcggatgttgccaacgttgtcgacggttttgtcgaacaggatgactttgccaagtttaac
ggcgagcatacctcaagcataatgatccagtccaccggggatcaaaacgacctggctatt
gccgaagaggtgaaagcttatgtcgagcaaaaaaataaaagcctgccggcaggggccaag
cttaccatgtggggagattcttcctattacctgtctgagcgcctggacatgatgatcact
aacttaaccatgggggccagcctggtgttcctggtgctgaccctgtttttgcggattaaa
attgccttttgggtgatgataggcatccccatcagttttttcggcgcttttattatgatg
cccttgctgggggactggtcggtttccatcaatatgatcagcttgtttgcctttattatg
gtgctgggcatagtggtggacgatgctatagtgatcggggaaagcgcctatagcgagatc
cagaattacggccactccaccgacaatgtgatccgcggcaccttgcgggtggctatgccg
gcgacattcggtgttttgaccaccatagccgcctttgctcccctgctaaccatagaagca
acctttgccgctttctttcgggctattgccttagtggtatctttttgcctgattttttcc
ttaatcgagtcgaaatggatcttaccagctcacctggcgcatatgcgctaccggccattg
acctgggaaaacgccaatgttatcgagcgtatgcaaatggcttttaaggaaaaactggag
cattttattcatcacaggtatcaggactggctggagagggcgctgcatgcccgttataac
actatggcggtatttgtcgccatattgatcttatccctgagcctgatcaccggcggattg
gtaaaaatggaggtttttccttccattcccagcgactttatccagggcaagatagtcatg
gtgaacggcagctcggcccatgaccgcaacagggccatagacaaggtggaccgggcggcg
caggcgattgtggctgaaaacccgcatctggggataaactttatcaaacataccatggtg
tttacccaggggaatacccaggcaacctttattttggagctggtgaaaccggatcagcgc
gagcttagcgcctatgacattgaaaagctgtggcgtgaacgtatcggtgaaattcccggc
gccaaggaattgcgtttttatgccggcaccaatgccggcggagatgccgcactggagttt
cagttcaacggcagtaatgacagggagctggaagccgccgcccaggcgttgcaggataag
ctgaaggagtatgacggggtttatgatatccgtaactcattcagccgcggcagccaggag
ataaagctggatattaaacccgaagcggaaattttgggcctgaccctgacggatctggca
cgtcaggtgcgccaggcgttttacggtgaggaagcgcaaaggatccagcggggacgggac
gaactcaaagtgatggtgcgttacccgaaagagcagcggttgtcggtttttgatcttgaa
gacatgtggatccgcacgccggacggcaaagaagtgcctttttaccaggtggcggatatc
agtatcggtcagggattttccaccattacccgggtgaaccagaagcgcgccatcaccatt
tcggcggatatcgacagtgaaaaggtcgagtcgcggaaaatcgttgccgaaatgaatgag
agcggtattccggatatcctcagcaattatcccagcgtcagatatggcatggagggggcc
agcaaagagcaggcggactttttgcgtcagctggcgatggcgggtgtaggcgccctgttc
ctgatttattgtctgatcgccatccctaccaagtcctatgttcagccgttggtgatcatg
tcggtgatcccctttggcattatcggcgccattgccggtcactggcttttgggcaaaacc
atcaacatgatgtcgatctacggttttatcgccctgagcggcgtggtggtaaacgacagt
ttgatcctggtggactttatcaataagggcaaaacctcggggcggcgcatggtggatatt
gtgatgcaggcgggaacgcaaaggttccgggctattttactgacttcgttaacgacgttt
ttcggcgtgttacccctctactttgaaaccagcctgcaggcgcagtttattattcccatg
gctatttctttaggcttcggtattgtgtttgcgactgtgatcaccttatttttgatcccg
gcattatacctgatcaaagaagatcttcaggggctgtttagccgcgaaagggcacaagag
ataatcagggaatga
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