Thalassomonas viridans: SG34_008580
Help
Entry
SG34_008580 CDS
T08831
Symbol
bamA
Name
(GenBank) outer membrane protein assembly factor BamA
KO
K07277
outer membrane protein insertion porin family
Organism
tvd
Thalassomonas viridans
Brite
KEGG Orthology (KO) [BR:
tvd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
tvd03029
]
SG34_008580 (bamA)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tvd02000
]
SG34_008580 (bamA)
Mitochondrial biogenesis [BR:
tvd03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
SG34_008580 (bamA)
Transporters [BR:
tvd02000
]
Other transporters
Pores ion channels [TC:
1
]
SG34_008580 (bamA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
POTRA
POTRA_1
TbpB_B_D
Motif
Other DBs
NCBI-ProteinID:
WDE06930
LinkDB
All DBs
Position
1910591..1913050
Genome browser
AA seq
819 aa
AA seq
DB search
MIIKKIALAVLLGALGTNVQASEEFQVEDIQVNGLQRVALGAALTHIPFNVGDTLNEFRI
SQSIKALYRSGHFNDISVSRDGNRVIYRVQERATISDIIFEGNSDLKDEQLTESLDGSDI
RVGETLDKTVISGIEQGLEDFYHSVGKYNADVTTEITHLPRNRVNLKFIFSEGDAAAIQQ
INVVGNEVFSDEELLERIELKFDSPWWDFMAQDRYQKQTLQGDMETISSYYLDRGYLRFK
IDSTQVSMTPDKESVYIALNVTEGEQYTVSEVDFIGDLAGFEKTIRAINPLSKDKLYNGA
EVTYTEELISKFLGRYGYAYPKVVTIPEINDEDKTVKLSISVDPGKRIYVNRINIKGHSV
TADRVIRREMRQMEGAWLSNAQVESSKAWIARLPYVETVEFETNQLPGEDDLVNVDFDVK
EQASGSFTAGIGYGSQTQLSLNAGIQQNNFLGTGNRLAFNINTVSYSRSISVSYTDPYFT
VDGISLGGQIYYNEFDAGSANLEKYENQTYGIGVNLGFPIDEYVRLNFGLGYKSNGITRL
QSYEQIQGFYDIYSNPDKPDEKLTFETFDLSASISRSTLNRGTFPTAGSKQTLSAKITTP
NSDVNYFKLNLDTKWYFPLTRDQRWSVLTRFQAGYGNGYSTVGEHDQLLPFWENFRAGGS
DTLRGFESNIVGPRAVYRFPTVVSNPNGGSTVLGPDEDFIQISTRSVGGNAMAIGGVELI
VPTPFLDEGMSNSVRSSLFVDVGNVWDTEFDLDDYRDLAEDEFLKIKDFSDPGSFRSSAG
LSIQWISPMGPMIFSFAKALKKEDDDDTSFFSFNIGKTF
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgataattaaaaaaattgccctggccgttttattaggcgcgttaggaacaaatgtacaa
gcatccgaagaatttcaggttgaagatattcaggttaacggcctgcagcgggttgccctg
ggggcggcgttaacccatattccttttaatgtcggcgatacccttaacgagtttcgtatt
tcccagtcgattaaggccctttaccgctccggacattttaatgatatcagcgtgtcccgt
gacggcaatcgggttatttaccgggtgcaggagcgcgcgaccatcagtgatatcatcttc
gaaggcaacagcgacctcaaagacgagcagctgacggaaagcctggacggcagcgatatc
cgggtgggggaaaccctggataaaaccgtgatttccggtatagaacagggcctggaagac
ttctaccacagcgtcggtaaatataacgccgatgttaccactgaaatcacccacttaccc
cgtaaccgggttaacctgaaatttatcttcagtgaaggggacgcggcggcgattcagcaa
atcaatgttgtcggtaacgaagtgttcagcgatgaagaattgctggagcgcatcgagttg
aaatttgattctccctggtgggactttatggcccaggacaggtaccagaagcaaaccctg
cagggggacatggaaaccatcagtagttactatttagatcggggctacctgcgctttaaa
atcgattctacccaagtgtccatgaccccagataaagaatctgtttatattgcccttaat
gtgaccgagggcgagcaatataccgtcagtgaagtggactttatcggcgacctggcgggg
tttgagaaaaccatacgcgccattaatcccctgagcaaggacaagctttataacggtgcg
gaagtcacttataccgaagagctgatcagcaagttcctcggccgctacggttatgcctat
cctaaggtggtgaccatcccggaaatcaacgatgaagataaaaccgtaaaattatctatc
tcggtcgaccccggcaagcgtatttatgttaaccgcatcaatatcaagggacacagcgta
acagcagaccgggttatccgccgggaaatgcgccagatggaaggggcctggttgtccaac
gcccaggtagaaagctccaaggcctggattgcccgcctgccttatgtggaaacggtagag
tttgaaaccaaccagctgccgggtgaagacgacctggtgaacgtcgattttgatgtcaaa
gagcaggcctccggctcctttaccgcgggtataggttacggctcgcaaacccagttaagc
ttaaatgccggtatccagcaaaataatttcctgggaaccggtaaccggttagcctttaac
atcaataccgtcagttattcacgcagcatcagcgtctcctatacggatccctatttcacc
gtggacggtatctcccttggcggacagatttattacaacgaatttgatgccggcagcgcc
aacctggaaaaatacgagaaccagacctatggtatcggggtcaacctgggcttccctatc
gacgaatatgtacgcctgaattttggcctcggctataagagcaacggtattacccgtttg
cagtcttatgagcagattcagggcttctacgatatttactccaacccggataagccggat
gaaaagctgacctttgaaacctttgatctttcggccagcatttcccgttcgaccctcaac
cggggcacattcccgaccgcgggttcgaaacagacgttaagcgctaagatcacgacgccg
aactcggatgtcaattactttaagcttaacctggataccaagtggtacttcccgttaacc
cgggatcagcgctggagcgtgttgaccaggttccaggcaggttacggtaacggctacagt
accgtaggcgagcatgatcagctgctgccgttttgggaaaacttccgcgccggtggttca
gacaccttaaggggcttcgagtccaatatcgtcggtccgcgtgcggtttaccgtttccct
acggtggttagcaatcctaacggcggtagcacggtattagggccggatgaagactttatc
cagatttctacccgctccgtcggcggtaacgctatggccataggcggcgttgaactgata
gtgccgacgccgttcttagacgaaggcatgtccaacagcgtacgcagcagtttgtttgtt
gatgttggtaatgtctgggacaccgaatttgatcttgacgattatcgcgatttagctgag
gatgagttccttaaaatcaaggatttctcggatccaggcagtttccggagctctgccggc
ctgtcgatacagtggatatcccctatgggaccgatgatctttagttttgcaaaagcgctg
aaaaaagaagatgatgacgataccagcttctttagctttaacataggtaaaaccttttaa
DBGET
integrated database retrieval system
