Thalassomonas viridans: SG34_016250
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Entry
SG34_016250 CDS
T08831
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
tvd
Thalassomonas viridans
Brite
KEGG Orthology (KO) [BR:
tvd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tvd03400
]
SG34_016250 (sbcD)
DNA repair and recombination proteins [BR:
tvd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SG34_016250 (sbcD)
Archaeal homologous recombinant proteins
SG34_016250 (sbcD)
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
FBPase_2
Motif
Other DBs
NCBI-ProteinID:
WDE02989
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Position
complement(3675382..3676644)
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AA seq
420 aa
AA seq
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MRILHTSDWHLGQYFYGKSRAVEHQGFLSWLLEQVSTFSVDLVVVAGDIFDTGTPPSYAR
EMYFDFVVQLNRLGCQLLILAGNHDSVAMLGESKQLLAHLSTRVIPAVSEDLNQQVFVVK
NKQGDDALVVCAIPYIRPRDVIKSRAGQSAQEKQQVLQQAISKHYHSLYRRAEQLATEAA
DGRREEKLPIMATGHLTALGVSASESVRDIYIGTLEAFPAREFPEADYIALGHIHRGQKV
AKTEHIRYSGSPLALSFDEAGQGKQVLLADFDGGVLDKVTPLEIPCFQPLFMVKTSLESL
GQEIRQLAAEHGEELQPGQTLWLDIEINSGDYLLDLQGQIDVLLEDLPIEVLRIRRSKKS
RQSLSAGGDKITLDELSVTDVFTSRLAQEDWQTDEELVRKQRLTALFLQTAESVKTEQGL
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcgtattcttcatacctcagactggcatctgggacaatatttttatggcaaaagccgg
gccgttgagcaccagggttttttatcctggctgctggagcaggtcagcactttctctgtg
gatttagtggtggtggccggagatatttttgataccggcacaccccccagttatgcccgg
gaaatgtattttgattttgtggtgcagttaaatcgcctcggttgccagttgctgatttta
gccggtaaccatgattctgtggctatgctcggcgagtcgaaacaattgctggcgcattta
tcgacccgggtgatcccggcggtaagcgaagaccttaaccagcaagtttttgtggtcaaa
aataaacaaggagatgatgccctggtcgtatgcgccattccttatatccggccaagagat
gtcattaaaagccgggccgggcaaagcgcacaggaaaagcagcaggtactgcaacaggcc
attagcaagcattaccacagcctgtaccgccgggccgaacagctggcgacagaggccgca
gacgggcgcagggaagagaaactgccgattatggccaccggccatcttaccgccctgggg
gtcagtgctagtgagtcggtgcgagatatctatatcggcaccctggaagcctttcctgcc
agggaatttcccgaggctgattatatcgccctgggtcatatccaccgcggacaaaaggtg
gcgaaaaccgagcatatccgttacagcggctctcctttggcgttaagttttgacgaggcg
gggcagggcaagcaggtattgctggcagactttgacggcggagtactggataaagtgaca
ccgctggagatcccctgtttccagcctttgtttatggtgaaaacgtcattggaaagcctg
gggcaggaaatcaggcagctggcggcggagcacggcgaggagctgcagccggggcaaacc
ttgtggctggatatagagatcaacagcggcgattatctgctggacctgcaaggacaaata
gacgttttgcttgaggacctgccgatagaagtgctgaggatccggcgcagtaagaaaagc
cgtcagtccctgagcgccggcggggacaagatcactttggatgagttatcggtgacagat
gtttttaccagccgtctggcacaggaagactggcaaacagacgaagaacttgtccgtaag
caaagattaacggcgctttttttacagacggccgagtcggtgaaaacggagcagggctta
tga
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