Trichophyton verrucosum: TRV_00272
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Entry
TRV_00272 CDS
T01615
Name
(RefSeq) hypothetical protein
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
tve
Trichophyton verrucosum
Pathway
tve03022
Basal transcription factors
tve03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tve00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
TRV_00272
09124 Replication and repair
03420 Nucleotide excision repair
TRV_00272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tve03021
]
TRV_00272
03400 DNA repair and recombination proteins [BR:
tve03400
]
TRV_00272
Transcription machinery [BR:
tve03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
TRV_00272
DNA repair and recombination proteins [BR:
tve03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
TRV_00272
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
9581747
NCBI-ProteinID:
XP_003025510
UniProt:
D4CZN0
LinkDB
All DBs
AA seq
386 aa
AA seq
DB search
MVTEPFSTSLRQALMGEDQQGSFGVISVTPDKYPVSVADLDEYARQQWEAVLGYMVGMSS
LSGGRETITLSKGVKQLLQACHLVEVRDRRVEITKEGFAFVLQDVNTQVWHILILYVENA
EAIGMESVEVLSFVFLLSSLELGQSYEKKDLTPTQLRTLADLTDFGIVYQHTPASGSTRF
YPTRLATTLTSDSLAMSGPISGEPAVPTTTAGTTTSGDAGTGFIIVETNYRLYAYTSSPL
QISLISLFTTLKFRFPNLITGKITRQSVRRAIEMGITADQIISYLTTHAHPQMRKTKKST
SNVSSSVLPPTVVDQIRLWQLERDRIKATSGFLFKEFDTFAEFEAPCKYAEEIGVLVWKS
DSRRMFFVTRHEQVAAFLRSRAASRG
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggtcaccgaaccgttttccacttctttgcggcaagctctcatgggagaagaccaacag
ggctcgtttggagttatatcagtgactcccgacaagtatccggtctccgtcgcggattta
gacgaatatgcaagacagcaatgggaggctgtgcttgggtacatggttgggatgagctcg
ttaagcggaggacgggaaaccatcactctcagcaaaggggtgaagcagcttcttcaggcc
tgccatctggtggaagtccgagatcggagagttgaaattacgaaagaaggattcgccttt
gttctacaagacgtcaatacccaggtctggcatatactcatcctctacgtcgagaacgca
gaggctatagggatggaaagcgtcgaggttctctcgttcgttttcttgcttagtagcctt
gagctcggccagtcttatgagaaaaaggacctcactcccacacagcttcgaacacttgcc
gatctcactgattttggcattgtctaccaacatacgcctgcttctgggtccacccgattc
taccctacccggctggctactacacttacttctgactctttggccatgtcaggcccaata
tcaggagaacctgcggtcccgaccacaactgcaggtactacaacgtccggtgatgcaggc
accggattcattattgttgaaacaaactaccgtttatacgcatacacatcatcacctcta
cagatatctctcatctccctctttaccactctaaaattccgatttccgaatcttattacc
ggcaaaataacccgtcaatccgtccgccgagccattgaaatgggtatcacggctgatcag
attatatcgtatctcaccactcatgcccatccacagatgcgtaagacgaaaaaatctacg
tcaaacgtttcttcttcggtcttgccacctactgttgtcgaccaaatacggctttggcag
ctggaacgagatcgaatcaaagcaacatcaggatttcttttcaaggagttcgacaccttt
gcggaattcgaagctccttgcaagtatgccgaagaaatcggtgtcttggtttggaaatct
gattcaaggaggatgttttttgttaccagacatgaacaggttgctgcgttcctacgtagc
agagcggcgtcaaggggttaa
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integrated database retrieval system
