Trichophyton verrucosum: TRV_01617
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Entry
TRV_01617 CDS
T01615
Name
(RefSeq) hypothetical protein
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
tve
Trichophyton verrucosum
Pathway
tve03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tve00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TRV_01617
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tve03041
]
TRV_01617
Enzymes [BR:
tve01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TRV_01617
Spliceosome [BR:
tve03041
]
Complex A
U2 snRNP components
U2 related factors
TRV_01617
Complex B
TRV_01617
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
9579386
NCBI-ProteinID:
XP_003024266
UniProt:
D4D3F7
LinkDB
All DBs
AA seq
1171 aa
AA seq
DB search
MARDTRSPSPVGSTYSSSKRSRRGDDNYDKSRRHDVKGDAIVTEAGTGIETFTDIEIALL
ILETLVTIPPIAPEEAVRDLDTVLVREKIVVATDIEAGAGIEPTVADEMILVIGVVDEGM
APLTPDVLLDGMGVVLFTQGSANLVQVSKQASTASPAQTDEQKKAERLAKLEAWKQKQAA
ERERKQNELAASGPRGILDEIDKKVALSRGVSTTTTSTQPTASSHSAGTARVRDTTSSPT
PEQLKKTTVASGSTKVSEASTLSSASAVANKSSVGASSSPAAAPLKSSGNVSGFGLGTKN
LSDSNKLSVKRTLNFGEEESKGTKLLKLPDSSLEDISANTTPQDGDDDDDDDTVMQDGGT
EEENAAAARAAAERREQNRVQPEVSSDENKPEEPQPKESSNDIAMTDSTAEPEAEEEIDP
LDAFMSDLKQSTSTPKQSVKPSSSKLQQPEAMFGDENDINMDPVEPDADDFFALANKSKR
KKDIPTVNHSKINYEPFRKNFYTEPVDLAGLSEAEVANIRLELDGIKVRGVDVPTPVQKW
SQCGLGVQTLDVIRKLGYEGPTSIQSQAVPAIMSGRDVIGVAKTGSGKTIAFLLPMFRHI
RDQRPLENMEGPISLIMTPTRELATQIHRECRPFLKALNLRAVCAYGGAPIKDQIAELKR
GAEIIVCTPGRMIDLLTANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKILGNIRPNR
QTVLFSATFPRNMEALARKTLSKPIEIIVGGRSVVAPEITQIVEVRNDDAKFVRLLELLG
NLYSDDENEDARTLVFVDRQEAADRLLRDLMRKGYPCMSIHGGKDQIDRDSTIDDFKAGI
FPILVATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEDQER
YSVDISKALKQSGQPVPEPIQKMVNAFLDKVKEGKEKASGSGFGGKGLERLDQERDATRN
RERKTYKTGEEGEDEDKEEDKKEKEADLFSRAASAVQSSTATPALGTPGGVDLDGKITVH
RTQKDTSSSAGKNTLDKVGSAVADIHARLNKAGVMRSGVPIDNKGPDAGAFHATLEINDF
PQKARWAVTNRTNVAKILEATGTSITTKGSFYPAGKEPQPGENPKLYILVEGDTELVVTN
AMRELMRLLKEGTIAAADSDARAPSGRYNVV
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atggccagggatactcgctcaccatcacctgtaggcagcacgtattcttcgtcgaaacga
agccggagaggcgatgataactacgacaagagcagacgccatgatgtgaagggagacgcc
atcgtgacagaggccgggaccgggatagagacctttaccgacatagagatcgctctgttg
atactcgagactctcgtgacaatacctcctatcgccccagaagaagccgttcgcgaccta
gataccgttctcgttcgcgagaagatagtcgtggctaccgatatcgaagcaggagcaggg
atagagcctaccgtagcagacgagatgattctcgtgatcggggtggtagacgaagggatg
gctccgctgactccagacgtgcttctcgacgggatgggagttgtgttgttcacccaggga
tccgctaacttagttcaggtttccaagcaggcatctactgcatcccctgcccaaactgat
gaacaaaagaaggctgaaagactagcaaagttggaggcatggaagcagaaacaggcagca
gaacgtgaacgaaaacaaaatgagcttgccgcaagtggaccaagaggtattctcgatgaa
attgacaagaaagttgctttatcgcgtggtgtatccacgactaccacttcgacacagccg
accgccagctcacattctgctggaacagcaagagttagggatacaacatcgtccccaact
cccgagcaactgaagaaaacaaccgtggcttctggtagtactaaagtgtccgaagcctct
actctttcatctgcaagtgctgtggctaacaaatcttcagttggtgccagctcttcgccc
gctgctgcaccacttaaatcatcaggcaatgtcagcggatttggcctagggaccaaaaat
cttagcgactcaaacaaactaagcgtgaagaggacgctcaattttggagaggaggaatcc
aagggcacaaaacttttaaaactccctgactcgtccctagaagatatttctgctaacacc
accccgcaagatggtgatgacgatgacgacgatgacactgttatgcaagatggtggtacc
gaagaggagaatgccgctgctgcaagggccgctgcagaacgacgtgaacagaatcgcgta
cagcctgaagtatcatctgatgaaaacaaacctgaggagccccaacccaaggaatcttcc
aatgatatcgccatgaccgacagcacggctgaaccagaggcagaggaagaaattgatccg
cttgatgctttcatgtcggacttaaaacaaagcacatctacaccgaagcagagtgtcaaa
ccctctagctcgaagcttcaacaacctgaagcaatgtttggagacgaaaatgacattaac
atggacccagttgaaccagatgcagacgattttttcgcgttagctaacaaatcaaaacgt
aaaaaagatatacccacagtcaaccattcaaaaataaactacgagccgtttcgaaagaat
ttctacaccgagcctgttgatcttgctggtctaagcgaagcagaggttgccaatatacgc
ctagagctggatgggataaaagtccgaggcgtcgacgtcccgacgcccgttcaaaaatgg
tctcaatgtggtctaggtgtccaaaccctagatgttatacgcaagctcggttatgaagga
ccaacttcaattcagtctcaggcagttccagcaattatgtccggccgggatgtaatagga
gtagcaaaaacaggctccgggaagaccattgcttttcttctccctatgttccggcatatc
agagaccagcggcctttagagaacatggaaggcccaataagccttatcatgaccccaact
cgagagcttgccacccaaattcatcgggaatgcaggcctttcttgaaggccttgaacctt
agggctgtctgtgcatacggaggagcgccgataaaggaccaaattgcggaattaaaacgg
ggcgcggaaattatagtctgtactccgggcagaatgattgatttgcttactgcaaactcg
gggagggttacaaacttgcgcagagtgacgtatgtggtccttgacgaagctgatcgtatg
tttgacatgggctttgagcctcaagtgatgaaaatccttggtaacattcggcccaatcgt
caaactgttttattctccgccactttccctcgaaacatggaagcgttggcccgaaagacc
ctgtcaaagcctattgagattatagttggcggaagaagcgttgttgccccggagatcacc
caaatcgtcgaagtgcggaacgatgacgccaaatttgttcgtctcctagaattactggga
aacctttactctgacgatgaaaatgaagacgcccgaacgctggtgtttgttgataggcaa
gaagcagcggatcgcttgctacgggatttaatgcgcaagggctatccctgcatgtcgatc
cacggtggaaaggatcaaattgaccgcgattcaactatcgatgactttaaggcgggcata
ttcccaattctggttgccacgtcagtagcggcacgaggacttgatgtaaagcagctcaag
cttgtcgtgaattatgatgctccaaaccatcttgaggactatgttcaccgggcgggtcgc
accggacgggcaggtaacaccggtacggcagttacattcctaactgaagaccaggagcgg
tattcggttgatatctcaaaagccctcaagcagagtggtcaaccagttcctgagccaatt
cagaaaatggttaatgcattcctggataaagtaaaggaaggcaaagagaaagcgagtgga
tccggatttggaggtaaaggactggagcgacttgaccaagaacgtgacgctactcgtaac
cgagagcgaaagacgtataaaactggagaagagggtgaagatgaagataaggaggaagac
aagaaagaaaaggaggctgacctgttcagcagagctgcctcggccgtccaatcttccacc
gcaactccagctttgggcacacctggaggtgtggacctggacgggaaaatcaccgtccat
aggacacaaaaagatacaagctcgtctgccggcaaaaacacccttgataaagtaggctct
gctgttgcagacatccatgctcgccttaacaaggctggtgtcatgagatccggtgtgccg
attgataacaaaggccctgatgctggagcttttcatgccaccctcgagattaatgacttc
ccacagaaagcccgatgggctgttaccaaccggaccaatgttgccaaaatactggaagca
actgggacttcgatcacgaccaagggcagcttctacccagcaggaaaggaaccccaaccg
ggagagaatccgaaactgtacattcttgtcgagggtgatacagagctggtagttaccaac
gccatgcgtgagctaatgcggctattaaaagagggaactattgccgcagctgatagtgat
gccagggcgccgtctggccgctacaatgtggtataa
DBGET
integrated database retrieval system
