Trichophyton verrucosum: TRV_03126
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Entry
TRV_03126 CDS
T01615
Name
(RefSeq) hypothetical protein
KO
K12600
superkiller protein 3
Organism
tve
Trichophyton verrucosum
Pathway
tve03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tve00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TRV_03126
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tve03019
]
TRV_03126
Messenger RNA biogenesis [BR:
tve03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
TRV_03126
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_22
TPR_17
TPR_2
TPR_19
TPR_12
TPR_14
TPR_1
TPR_11
TPR_16
TPR_8
TPR_6
Coatomer_E
Motif
Other DBs
NCBI-GeneID:
9581434
NCBI-ProteinID:
XP_003022744
UniProt:
D4D7P2
LinkDB
All DBs
AA seq
1424 aa
AA seq
DB search
MAPKSALKAIRADLDAGDYSQAAVKASELCTQDPKNYHAEKLNEYDASEKAYESAIKIKD
SDKTAWQGLVALYESQGRKRLEAYETAVERLCNIFADTYAYLLCLLKYNDEMTNPFASEE
YGRAHGVLEKYINFVKLHGSKLQYIHALQLRLPTSPIYKCVEGLAPRPSETYLRVAELAE
QEEKEFINREIGERRTRLGARIDQVTTEVKREAFNRSVLNELYQGIIDWTHDDETRRYYE
EKLLQRHYDHLRILPSKEKPTGRELVVKAARDMVIIKHPFELAWRITFDWTDTEELSSLD
VTLLRDFIRLFPDHGLSKILNGFLYTNLSPFPYQNLYNDVDGTNTTENPEIEAQYMVADH
LLIMAEGLDQASDSVLAHRIMGAVYSHLGEFQTVIKVSRSGLAINSTIRHDTGLKLQNID
DSLNILLATALIPHQSPRHHPEAKAIFQDILSRKPQEDNCLLGLGLILEESHDFAAAMDL
LAQALIRDENNAKVRSELFWCKVQNGELAAALKGFEETLPLVQCPGSRWHNLRAEVLYRI
GFCEWELDPSPSARKTRNGAYSKFLAAIQADMNYAPAYSSLGVYYADYKKDKKRSQRCFH
KAVELSSSEVMAAERLAREFAAQGDWDLVEAIAQRVVDSGKAKPSPGSKRPGYSWPFAVL
GVVEINRQLYAKSIVHFQTALRISPNDYQCWVGLGESYYNSGRYIAATRAFRNAQSLECT
LPESERGQIWYSKYMMANLERELGNYAQAIMMYEDVTHLRIEEFGVSVALLQTLTESAWK
AAESGFFGEATETAKRAIETGLSITNYHPNGFNLWKSIGDAFSIFSWISNKSSYLPIAPF
RAVLKTTCDVTAFNILSNLDGIGENFDTLFESLLGSNETAQVISIYSTILAFKYALSATA
KDTHAQALAWYNLGWAEYRAHMQRSSFLKGPRSNKRTGFIKAATRCFKKAIELEAGNADF
WNALGIATASQSPKVAQHAFVRSLHLNERNAFVWANLGAFYLLNDDYQLANEAFTRSQSA
DPDHSNAWLGQGLLAMLIGDAVEARELFTHAFGLGNSSGAFAKQQYAISMFDDISSSPEP
TPAQLLQPLFGLRQLRSVDPSELFHYHLSSLFAERTGDLEDCISDLETVCSGVEAAYEST
ESIGSLLKYAQASADLARIQLGRLEYKEAADSAETALNLMVEEGIHECHGGLYQVIRLSA
HLTAGLAFYYLGRMDESIEMFRDAIQGANNSPDVTCLLAQVLWAKGGDEERLVAREQLFE
CVEKYPEHVGAITLLGVIGLLDTDEDTIEAVESDLQAMRARTDLDTHSIGKIVKLLASIP
ALRYEAEAEATRTSEMLKQATTSVMISPSQPQGWMALSSVSTERYAAEMAVRTALVSIPP
RGKLDAEALCQAYSLVGTRKSALSGVMVAPWSKNGWDELIQCCS
NT seq
4275 nt
NT seq
+upstream
nt +downstream
nt
atggctcctaagagcgccttgaaggcaatcagggcggatctagatgcaggagactactcc
caggcagctgtaaaggcatctgagctttgcactcaagatcccaaaaactatcacgcagag
aagcttaacgagtacgatgcatctgaaaaagcgtatgagtcggctatcaagataaaagat
agcgataagactgcctggcagggcctggtggcactctacgagtcacagggccggaaaagg
ttggaggcatatgagacagctgtagagcgcctctgcaatatctttgcggatacgtatgca
tacctgctatgcctcttgaagtataatgatgaaatgactaacccttttgctagtgaggag
tatggccgagctcatggagtgctggaaaaatatatcaactttgtgaaattgcatgggtcg
aagcttcagtatatccatgcccttcaactacggctacccactagcccgatctacaagtgt
gtagaggggttggcccctagaccttcagagacatatctgcgtgtagctgagctcgccgag
caggaagagaaagagttcatcaatcgtgagataggtgagcgtaggactaggctaggcgca
aggattgatcaggttactactgaagtaaaacgtgaagctttcaaccgcagtgtactcaac
gagctataccaagggattattgattggacacatgatgacgagacacgccgttactatgaa
gaaaagctgcttcagagacattatgaccacctccgcattcttccttccaaggagaaaccc
acaggcagagaattggttgtgaaggcggcgcgcgatatggtaattatcaaacacccgttc
gagctggcttggagaattacattcgactggaccgacaccgaagaactctctagtctagat
gttaccctgcttagggatttcatccgcttgtttcccgaccatggccttagtaagattctc
aacggctttctctatactaacctttccccatttccttatcaaaacctatacaatgatgtt
gatggaacgaacacgaccgagaaccctgaaatagaggcccaatatatggtagcagatcat
ctgttaataatggcagagggcttagaccaagcttctgactcggtcttggctcatcgaatc
atgggggcagtatattctcatcttggggaattccagacggttatcaaggtctctcggagt
ggcttggccatcaactctacaataagacatgacaccggacttaaactccagaacattgat
gattcattgaatatcttgcttgctactgccctaatcccacatcagtccccaagacatcac
ccggaagctaaagccatatttcaagatatactttcaaggaagccccaagaagataactgc
cttcttgggctagggctgatcctggaggagagccacgactttgctgccgctatggattta
ctagctcaagcattgatcagagatgaaaataatgccaaggtccgcagcgagttattctgg
tgcaaggtgcaaaacggggaactggcggctgccttgaaagggttcgaggaaaccttgccc
cttgttcaatgcccgggttcacgctggcataacttaagggctgaagttttataccgcatc
ggtttttgtgagtgggagctggatccatccccttcagcaagaaaaacccgcaatggcgct
tactccaagtttctggccgccattcaggcggatatgaactatgcaccagcctattctagc
ctcggggtgtattatgccgattacaagaaggataagaagagatcccagagatgctttcat
aaggccgtggaactctcatcttctgaggtaatggcagctgagcgcttagcacgagaattc
gctgctcaaggtgactgggatctggttgaggccattgctcaaagagttgtggattcaggc
aaagcaaagccttctccaggatccaagaggcctggctatagctggcctttcgctgtctta
ggtgttgttgaaataaacagacaactctacgcaaagagtattgtccattttcaaacggca
ctaagaatatcgcccaatgattaccagtgctgggtgggcttgggtgaaagctattataac
tcagggcgatacattgcggctaccagagcattcaggaatgcgcaatcattggaatgcact
ttgccggagtctgaacgaggacaaatatggtactctaagtatatgatggcgaatttagaa
agagagctcgggaattacgcgcaggcaataatgatgtatgaagatgtcacacatctgaga
attgaggagtttggggtatctgttgcattgctgcaaactcttactgagagtgcatggaag
gcagctgagtccggtttttttggggaagccactgagacagcgaagcgagcaatcgagacc
ggcttatctattacaaattaccaccctaacggattcaacttatggaagtcaattggtgat
gctttctctatattttcctggataagcaacaagtcgtcatatttaccaatcgcacctttt
agggcagtactcaaaacgacttgcgacgttaccgctttcaacattctttccaaccttgac
ggaattggggagaactttgacacgttgtttgaaagtttgctgggtagtaacgaaacggcc
caggtcatttccatatattcaactattctagccttcaagtatgcgctatctgctaccgca
aaagatacccacgcccaggcattagcctggtataatctaggttgggctgagtatagagct
cacatgcaacgatcatcgtttttgaaaggcccaagaagtaataagcggacagggttcatc
aaagctgcaactcggtgttttaaaaaggcaatcgaacttgaagctggcaatgctgatttt
tggaatgcactgggtattgctactgcgtcacaaagtccaaaggtagcccagcatgcgttc
gttcgtagtcttcacctcaacgagcggaatgcattcgtatgggctaatcttggagcattt
tatctcctaaatgatgattatcaattagcaaatgaagcgttcactcgctcgcaatctgct
gacccagaccactcaaatgcctggctaggccagggattattggccatgcttattggagat
gctgtcgaggcaagggaactatttacacatgcgtttgggcttgggaattcgagtggagct
tttgcaaagcagcaatatgccatatctatgtttgatgacatcagtagtagtcccgaacct
acaccagctcaactactccaacccttatttggcctacgtcagctgcgctccgtggaccct
tctgaactattccattaccatctctcatcactttttgcggaacggaccggagaccttgaa
gactgcatttcagacttagagacggtgtgttcaggggtggaggcggcatatgagtcaaca
gagtccatcggttcgctgctaaagtatgcccaagcgtctgctgacttggcgcgaatacag
ctggggcgccttgaatataaagaagctgcagacagtgcagaaacagcactaaatttgatg
gtagaagaagggatacatgaatgccatggtggactatatcaagtgattagactatcagcc
catttaacagctggcctggcattctactatcttggtcgaatggatgaatctattgagatg
ttccgtgatgcgattcaaggggctaataattcaccagatgttacatgcctgcttgcgcag
gtactgtgggcaaagggcggagacgaggagaggctagttgctcgagaacaacttttcgag
tgtgttgaaaaatacccagaacacgtgggagctatcactctgctaggagtcattggcctt
ctagatacggatgaggacaccattgaggctgtagagtcggatctccaagccatgagggca
aggactgatctagatactcatagcatcggaaaaattgtgaaattgctcgcaagcatccca
gctctaagatatgaggcagaagcagaggcaacgcgcacctctgaaatgctgaagcaagcc
acgacgtcggtaatgatatcaccaagccagccacaaggctggatggccctttcttcagtg
tctactgaaaggtacgctgccgaaatggctgttcgaacagcacttgtcagcattccgcct
cgtggaaagctcgacgccgaggctctttgccaggcatattcactggtaggaacaaggaaa
agcgcattaagcggggttatggtggcgccttggtctaaaaatggctgggacgagttgatc
caatgttgttcctga
DBGET
integrated database retrieval system
