Trichophyton verrucosum: TRV_03906
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Entry
TRV_03906 CDS
T01615
Name
(RefSeq) hypothetical protein
KO
K13026
ATP-dependent RNA helicase DHX57 [EC:
5.6.2.6
]
Organism
tve
Trichophyton verrucosum
Brite
KEGG Orthology (KO) [BR:
tve00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
TRV_03906
Enzymes [BR:
tve01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
TRV_03906
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RWD
Helicase_C
DEAD
HA2_C
OB_NTP_bind
HA2_N
UBA
AAA_22
nSTAND3
ATPase
AAA_29
DND1_DSRM
dsRBD2
AAA_23
AAA_16
Motif
Other DBs
NCBI-GeneID:
9578856
NCBI-ProteinID:
XP_003021958
UniProt:
D4D9W3
LinkDB
All DBs
AA seq
1348 aa
AA seq
DB search
MGPKKGGGNRAGPKKSSSSQPAEISISDFVAAGEKNEAKKSKAGAKSKGKDAGGEAANNP
EEPKKPSVRAVIGGASWTGKLPVNMLSEHCQKQKWAKPEYTMTKNADGFLADVILKKVNP
KTNDTVTLPPFRLPPSHRKLGTQPTAVEARHFAAAYALFRVCNMRNLHMMMPPTFRDLWK
DQFAALKAEDVKKGNGWMYEADPFTTFQERNNAVAELTRRKEQKAKEPAKQKEDRVQLGL
SSGGGSGSGNTGGRWLKAPKIDMGDKVRGRVEELIRRRAVWNPYGIEISESGRRSMMDEF
VKLGFRTRHVEEALSECKDREEALEWLLIHIPEDDLPPWSLPEGYTAGITLASNDLARES
KIKRLSAAGYSADLCSSVLDKYGNDERLAAEALQHLLIYSRDLDIESESPVNGNAIWEEE
HQTLEAIFDTKYERLSKNACQIMSEHGTLPSITYSFWNPARAVYPESPPVVAIVTKEIPA
YIRLSATRQAIQHAMADLRGEPMIFNIIDWLNENLPCILENPGKLRSISVEAGDNLNGEN
DLPRTSNPGSTSKSARGMALRPKGPANNDIRRSWEAKQTTPEQQKMLKARQALPAWDIQD
AILDEVHSHQVTIISGETGSGKSTQCVQFILDDLIRRDLGSSANIVCTQPRRISALGLAD
RVSAERCSSVGDDVGYIIRGDSKSKPGVTKITFMTTGVLLRRLQTAGESVVEALADISHV
VLDEVHERGLDTDFLLAVLREALRIRKDLKLILMSATLDANMFINYFGGDKQVGTVNIPG
RTFPVEDIYLDDVLRSTGFDSNTPYEGSDESEQSLGKAIQKLGSGINYDLISSTVQHIDA
QLGNEPGGILIFLPGTMEIDRCLSSMKHLQFAHLLPLHASLLPNEQKRVFNSPPPGKRKV
IAATNVAETSITIEDIVAVIDTGRVKETRYNPVDNIVRLEETWASQAACKQRRGRAGRVR
NGTCFKLYTRNAEKNMASRPEPEIRRVPLEQLCLSVKAMRGIQNVPDFLANTLTPPDNVA
VGGALHMLHRMGALDNDQLTALGRYLSMIPADLRCAKLMVYGVIFGCIEACLTIAAILTV
KSPFASPREAREEAKEARSSFSNGDGDLLTDLAAYQQWADKIREQGYRKAQVWCRDKFLL
PQTLQDISSNRAQLLGSLKDAALLPVDYKDPDCESRWNRHNKNTHLIRALISGAFNPQIA
SISFPEKKFASSMTGTIELDPEARTIKYFNQENGRVFVHPSSTLFDAQVFSGSAQYVSYF
TKMATTFNAYGLLLFTGQVTLDTLGRGVLVDEWLRLRGWARIGVLISRLRMMLDEVLRRK
VDNPGLNVEEDEVIDVVRHLVLLNGQDL
NT seq
4047 nt
NT seq
+upstream
nt +downstream
nt
atgggcccaaaaaagggcggtgggaatcgtgctgggcccaagaaatcctcgagctcgcag
ccggcagagatctccatatctgactttgttgctgcgggcgagaaaaacgaagctaagaaa
tcgaaggctggagctaagtccaaaggcaaagatgctggaggggaggccgcgaacaatcca
gaggaacccaagaagccctccgtgagggctgttataggcggggcgtcatggacaggtaaa
ctgcctgttaacatgctctcggagcattgtcaaaagcagaagtgggcaaagcccgagtac
acaatgactaaaaacgcagatggctttctagcagatgtgatattgaaaaaggttaacccc
aaaacgaacgacacagtgacactacccccattccgcctgcctccctcccacaggaaatta
ggcacacaaccgacagctgtggaagcccgccactttgctgctgcatatgctctgtttcga
gtatgtaacatgcggaatttgcatatgatgatgcctccaacttttcgtgatttatggaaa
gaccagtttgccgcacttaaggctgaagacgttaaaaagggaaatggctggatgtatgaa
gctgatcctttcacgacattccaagaaaggaataacgccgtcgctgaacttacacggcgg
aaggaacaaaaggcgaaggaaccagctaaacaaaaagaggaccgtgtccagctggggcta
tcgtcaggtggaggtagcggcagtgggaatacagggggccgctggctaaaggcgccgaaa
attgatatgggtgataaagtgcgtgggagagttgaagaactgattagaaggagagctgtc
tggaatccgtatgggattgaaatatctgaaagtggaagaaggagcatgatggatgagttt
gtgaagcttggcttccgaacccgccatgttgaagaagcactttcagaatgtaaagataga
gaggaagctcttgaatggctacttatccatataccagaagatgaccttcctccgtggagt
ttaccggaaggatataccgctggcataacgttggcaagcaacgaccttgcacgagagtct
aaaataaaacgactgtctgctgctggatactctgcagatctctgcagctcagttcttgat
aagtatggaaacgatgaacgacttgcggcggaagccctgcaacacctgttgatttacagt
cgagaccttgatattgaatctgaaagtccggtcaacggtaatgctatttgggaggaagaa
catcaaacgttagaggctatttttgataccaaatatgaaaggctatctaaaaacgcatgc
caaatcatgtctgaacatgggactttaccatctattacatactctttctggaacccagcg
agggctgtttaccccgaaagtcctcctgttgtggccattgtcacaaaggaaatacctgcg
tatatccgactgagtgctacacgacaagcaatacaacatgccatggccgatcttagaggg
gagccaatgatttttaacataattgactggctgaatgagaacctaccttgcattttggag
aatcccgggaaattacgaagcatttctgtggaggctggtgataatttgaacggcgaaaat
gatttacctcgtacctctaatccaggatcaacgtcaaagtcggctaggggaatggcacta
cggcctaagggccctgctaataatgacatccgacgtagctgggaggccaaacagactaca
cctgagcagcagaagatgctcaaagcaagacaagctctgccagcgtgggatatccaagat
gcaattctggacgaagttcactcacaccaggtcacaattatctccggtgagacaggtagt
ggaaaaagtactcaatgtgtccagtttatattggacgatttgatacggcgagaccttggt
tcatccgcgaatattgtttgcacacaaccacgaagaatttctgccctaggtcttgccgat
cgcgttagtgcagagcgatgttcaagcgtcggtgacgatgttgggtatattattcgagga
gattcaaaatcaaaaccaggtgtaactaagatcacatttatgaccaccggtgtcctacta
cgacgtctgcaaacggccggcgaaagtgttgttgaagctttagccgatatcagccatgtg
gttcttgacgaggtccatgagagaggtctggatactgattttctcctcgccgtactgaga
gaagctttgagaatccgaaaggacctgaaattgatcctgatgagtgccactctagatgcc
aatatgttcatcaactattttggtggggataaacaggttggaacagtcaatattccgggt
aggacgttccctgttgaagacatatatctggatgatgtgctccgaagcactggcttcgat
tcaaacacgccatacgagggctctgacgaaagcgaacaatcgctgggcaaagctatccag
aagctgggcagtggaatcaactatgatcttatatccagcactgttcaacacattgatgct
cagctcggaaatgaaccgggtggaatcttgatcttcctaccaggaacaatggaaatagac
agatgcttgtcttccatgaagcatttacaatttgcccacctacttcctctgcacgcttca
ttgctcccaaatgagcagaaacgagtcttcaattcaccgccgcctggaaagagaaaagtg
attgcggccacaaatgttgcggaaacatccattacgatcgaggatatagtggccgttata
gatactggtcgagtcaaagagacccgatacaacccagtcgacaacatagtacgactggaa
gaaacatgggcctcccaagcagcttgcaagcaacgtcgaggccgagctggacgtgtccgc
aacggtacctgctttaaactgtacactcgaaacgctgagaagaatatggcatcccgtcct
gagccagaaatccggcgtgttccccttgagcagctttgcctttctgtgaaggcgatgaga
gggattcaaaatgtacctgacttccttgcaaacactctcacacctccagacaacgttgct
gtgggcggagccttgcatatgctccatcgcatgggggcgcttgacaatgaccagctaact
gcccttggacgctatttatccatgattccggcagatttgcggtgtgccaaattgatggtt
tatggtgtgatatttggatgtatcgaggcatgcttgaccatcgctgctattttgacagtt
aagagcccgtttgcaagtccaagggaagcccgcgaggaagccaaagaggctcgaagttcg
ttttccaatggagatggagatcttttgacagatctcgctgcgtaccagcaatgggcggac
aagatccgtgagcaaggttatcggaaagcccaggtatggtgccgggacaagtttctactt
ccacagacactgcaggatatctcctccaaccgggctcagctccttgggtctttgaaagat
gcagcgcttttgccagtcgattataaggatcctgattgtgaaagccggtggaatcgtcac
aacaagaacacccatttaattcgcgccctgatatcaggtgcgtttaaccctcagattgcg
tcgatatccttccccgagaagaaattcgcttcatcgatgactggaaccatcgagcttgac
cccgaggctcgcacgatcaaatactttaaccaggagaatggcagagtatttgtgcatccc
agttctaccttgtttgatgcccaggtattttctgggtctgcacaatacgtgagttatttc
accaaaatggcaacaacatttaatgcctatggccttctgttattcaccgggcaagtgaca
ctggacactctcggtagaggcgtgctagtcgacgaatggctccggctccgaggttgggct
cgaatcggagtcctgatttctcggctgagaatgatgcttgatgaagtattgagacgaaag
gttgataatcccggtctcaacgtggaggaagacgaagtgattgatgtcgtccgccacctc
gtcctacttaacgggcaagatttataa
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integrated database retrieval system