Trichophyton verrucosum: TRV_05937
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Entry
TRV_05937 CDS
T01615
Name
(RefSeq) hypothetical protein
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
tve
Trichophyton verrucosum
Pathway
tve03022
Basal transcription factors
tve03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tve00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
TRV_05937
09124 Replication and repair
03420 Nucleotide excision repair
TRV_05937
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tve03021
]
TRV_05937
03400 DNA repair and recombination proteins [BR:
tve03400
]
TRV_05937
Transcription machinery [BR:
tve03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
TRV_05937
DNA repair and recombination proteins [BR:
tve03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
TRV_05937
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
Tfb4
Motif
Other DBs
NCBI-GeneID:
9584722
NCBI-ProteinID:
XP_003019969
UniProt:
D4DFI7
LinkDB
All DBs
AA seq
515 aa
AA seq
DB search
MARSDEEYSDAASVDDLDENLEEEDEDEDDIVDSRTASSRRRDRDRGGKSRKKKKRKQHG
GAEWEVARTWETLVEGADGTITATVDGLLEADKRKRCVFSFSTLGKHRLLRTKEKMLIIC
RLLKDTTPLQRGIIRHMILVLDLSFAMAEKDLRPTRYLLTLRYAQKFVQEFFEQNPISQL
GIMGMKDGIAVQISEMSGNPTEHMLALHALRAEDPKGLPSLQNALEMARGSLYHTPSHGT
REVIIILGALLSSDPGDIHQTITSLVADKVRVGIIGLAADVAICREICAKTNDGNDSSYG
VAIDEKHLWDLLLDVTTPPVTYSQRYSSNSLLMMGFPSRTVEPFPSLCACHSKPVRGGYM
CSRCGSKVCSLPAECPTCNLTLILSTHLARSYHHLFPLINWVEVPWKRASRSVSCFACGN
PFPAVPPRDKWDMRDRSIKGMSVSSRYECTVCHHHFCIDCDVFAHEVVHNCPGCQSGKPL
DVDSSSNPAAKPQPHTNGHSQNSQPADNGDAMNTG
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggcacgctcggatgaggagtacagcgacgcagcgtcggtagacgacctggacgaaaac
ctcgaggaagaagacgaagatgaagatgacatcgtcgactctcggacggccagcagtcga
cggagggatcgagaccggggcggcaagagcagaaagaagaagaaaaggaagcaacatgga
ggcgcggagtgggaggtagcaaggacgtgggagacactggtagaaggtgcggatgggacc
atcactgccactgtcgatggccttcttgaagccgacaagaggaagaggtgtgttttttcc
ttctctacgctggggaaacatcggctgcttaggacgaaagagaagatgttgataatttgc
aggttgctcaaggatactacaccgctacagcgaggtataatacggcatatgatacttgtc
ctcgacctctcctttgccatggcggagaaggacctgcgtccgaccagataccttctcact
ctcagatacgcgcagaagttcgtgcaagagttcttcgagcagaatcccatttcgcagctg
ggcatcatgggcatgaaggatggtatagccgtgcagatcagcgaaatgagcggtaaccca
accgaacatatgttggctctccacgccttgcgggcagaagacccaaagggcctaccaagt
ttgcaaaacgctctcgagatggcccgaggatctctataccacaccccatcccacggtacc
cgagaagttattattatccttggggccctcctctcatcggatccgggtgatattcaccaa
acgatcacttctttggtggcagacaaggtacgggtaggcataattggtctagccgccgac
gtagccatatgccgtgaaatatgtgccaaaacaaacgatggcaatgactccagttacggc
gtggctatagatgagaagcatctatgggacctcctgctagacgtcaccactccaccggta
acgtactcgcaacgctactcctctaactccttgctcatgatgggtttcccttcacgcaca
gtagagcccttcccttcactttgtgcatgccactccaaacccgttagaggcggctatatg
tgttcgcggtgtggcagtaaagtgtgttctttacccgccgaatgcccaacatgcaacctc
acgctcatcctctccacccacttggcgcgatcataccaccatcttttcccattgataaat
tgggttgaggttccgtggaaaagggcctcaagaagtgtcagttgctttgcttgtggcaat
cctttccctgctgtgcctccacgggataaatgggacatgcgagataggtccatcaagggt
atgtccgtcagcagcaggtatgaatgtacagtttgccatcaccacttctgcattgactgc
gacgtctttgctcacgaagttgtccataactgccccggctgtcagagcggtaaacccctg
gatgtggactctagctctaacccagcagcaaaaccccagcctcatacaaacgggcactca
caaaactctcaacctgccgacaatggtgatgcaatgaataccggttga
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