Trinickia violacea: FAZ95_05915
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Entry
FAZ95_05915 CDS
T09503
Name
(GenBank) RNA polymerase sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
tvl
Trinickia violacea
Brite
KEGG Orthology (KO) [BR:
tvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tvl03021
]
FAZ95_05915
Transcription machinery [BR:
tvl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FAZ95_05915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
HTH_28
Sigma70_r2
CSTF_C
GerE
HTH_23
Sigma70_ECF
PaaB
DUF134
TPP_enzyme_C
Motif
Other DBs
NCBI-ProteinID:
QCP48766
UniProt:
A0A4P8IKK5
LinkDB
All DBs
Position
1:complement(1291143..1291706)
Genome browser
AA seq
187 aa
AA seq
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MASDKELADFLAGVERRAFKQTVYAVRDDDAALDIVQDAMIKLAEKYGDRPAAELPLLFQ
RILQNATHDYFRRQKVRNTWVSLFSSLGNAEDDEFDPLETLESEQGSIGAESSEQQLERE
QVLALIDAEIQKLPARQREAFLMRYWEDMDVAETAAAMGCSEGSVKTHCSRATHALAAAL
KAKGITL
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagacaaggaactcgccgattttctggcgggcgtcgaaaggcgcgcgttcaag
cagacggtctacgccgtgcgcgacgacgatgccgccctagatatcgttcaggacgcgatg
atcaagctcgccgagaagtacggcgaccgtccggcagctgagcttccccttctctttcag
cgtattcttcagaatgcgacgcatgattattttcgtcgccagaaagtgcgcaatacttgg
gtcagcctgttttcgtcgctcggcaacgcggaagacgacgaattcgatccgctcgaaacc
ctcgaatccgagcaaggctccatcggcgcggaaagcagcgagcagcagctcgagcgcgag
caggtgctcgcgctgatcgacgcggagatccaaaaattaccggcacgtcaacgggaggcg
tttctcatgcgttactgggaagatatggatgtcgccgagaccgccgccgcaatgggctgc
tccgaaggcagtgtcaagacacactgttcgcgagccacgcacgcactggcggccgcgctc
aaggccaaaggaatcacgctatga
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