Trinickia violacea: FAZ95_28860
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Entry
FAZ95_28860 CDS
T09503
Name
(GenBank) TonB-dependent receptor
KO
K16092
vitamin B12 transporter
Organism
tvl
Trinickia violacea
Brite
KEGG Orthology (KO) [BR:
tvl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tvl02000
]
FAZ95_28860
Transporters [BR:
tvl02000
]
Other transporters
Pores ion channels [TC:
1
]
FAZ95_28860
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
QCP53096
UniProt:
A0A4P8IXG2
LinkDB
All DBs
Position
2:1499095..1501083
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AA seq
662 aa
AA seq
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MSTTIRKTAFFQKALSRHVAGVSSVLALSLGTQIAHAADDSTVPRSLQPAQISSDTTTLP
AVVVTADTQHLPQSFDQRYATTWVLTRQDLDRLSPEDPSITQALATLPGVTVSQTGGPGS
ASSVSIRGSSEQQVAVFIDGIRVGSSTTGIAEWQDLPTEAFDRVEVISGPAAASFGANAV
GGVVQMFTRHASSLPNQTTVSFGGGSNTTFDTQVRTSGSVPSTGPLSALSGLTYSLGLHD
YNTDGIDATQPVLALHEPGRNPYHAQDVDARLGYAHGDWSISTFALYHKSNLSFDNAGSF
DQQLDHQLTTGVAFHWDITPDTQFDQSVGYANDRQFYYASDPAIPTDEIDSQRFSTSTSL
THQERGFKLFGLPLSGETKLAYDFTREQAFLPIDIPAGVPTRNDSAVSLHRSTTLGALTL
FLAGRHEIVEGKAVNTGNVALSYAITPMYTARLSYGNAFRLPTFNDLYYPQYGNPNLQPE
RSDSVEAALDANTSFGTFTAAVYDTRVHDLISYNAATQAPDNIGQARIQGIDLSYKGTIA
KTTSVSLAVGILNPQDVSDDTWLNRRPRQTLSLIVDHTWDAFHLHALSTGVSVLYGGSTF
DDQLNTTYLPSYTTVDLRASYRVNSHLTVSANLSNIFNRQYVTAYGYNTLGRTAFGKVSY
TF
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccacgattagaaaaaccgctttctttcagaaagctttatcccgtcacgtcgcg
ggtgtttcctccgtcctcgcgctctcgctgggcacgcagatcgcgcacgctgcggacgat
tcgacggtaccccgatcactacagccggcgcagatttcctcagacaccaccacgttgccc
gcagtcgtcgtgaccgctgacacgcagcatttgccgcagtcgttcgatcagcgctatgcg
acgacctgggttctcacgcgtcaggatctcgaccgcctgtcccccgaggaccccagcatc
acgcaggcgctggccacgctccccggcgtcaccgtttcgcaaaccggcggccccggctcc
gcgtcgtccgtcagcatccggggctcgtcggagcagcaggtcgccgtgttcatcgacggt
atccgggtcggctcctcgacgacgggcattgccgagtggcaggatctgccgacagaggcg
ttcgaccgggtcgaggtgatctcgggcccggccgccgcttcgttcggcgcgaacgccgtg
ggcggtgtggtgcagatgttcacacgccatgcgtcgagtctgccgaaccagaccaccgtc
tccttcggcggcggctcgaacacgaccttcgacacgcaggttcgcacttccggcagcgtg
ccgtcgacgggcccgctctcggcgctctccgggctcacgtattcgctggggctgcacgac
tacaacaccgacggcatcgatgcgacccagccggtgctggcattgcacgagcccggccgc
aacccctatcacgcgcaggacgtcgacgcgcggctcggctacgcccacggcgactggtcg
atttccacgttcgcgctttatcacaagtccaatctctcgttcgacaacgcgggcagcttc
gaccagcagctcgatcaccagctgacgacgggcgtggcgtttcattgggacatcacgccg
gacacccagttcgatcagtcggtcggctatgcgaacgaccgtcagttctactacgcttct
gatccggccattccgaccgatgagatcgactcgcagcgcttcagcacgtcgacctcgctg
acccatcaggaacgcgggttcaagctgtttggcctgccgctgtcgggcgagacgaagctc
gcatacgacttcacgcgcgaacaggcattcctgccgatcgacatcccggccggcgtgccg
acgcgcaacgattcagcggtgtcgctgcatcggtcgaccacgctcggcgcgctgacgctg
ttcctcgcgggacgccacgagattgtcgaaggcaaggcggtcaacacgggcaacgtcgca
ctgtcgtatgcgatcacgccgatgtatacggctcggctgtcgtatggcaacgcgttccgc
ttgccgacgttcaacgatctctactacccgcaatacggcaatccgaaccttcagcccgag
cgcagcgattcggtcgaggcggcgctcgacgcgaacacgtcgttcggtacgtttaccgcg
gcggtctacgacacccgcgtgcacgatttgatctcctataacgcggcgacgcaggcgccg
gacaacatcggtcaggcgcgcattcagggcatcgacctctcgtacaagggcacgatcgcc
aagaccacgtccgtcagtctcgccgtcggcatcctgaatccgcaggacgtctccgacgat
acgtggctcaatcgccgcccgcgacagacgctcagcctgatcgtcgaccacacctgggac
gcgttccatctccatgcgctcagcaccggcgtgtccgtgctgtatggcggatcgaccttc
gacgaccagctcaacacgacgtatctgccgtcatacaccaccgtcgacctgcgcgcctcg
taccgggtcaattcgcatctgaccgtgtccgcgaatctgtcgaatattttcaaccggcag
tacgtgaccgcctacggatacaacaccttgggacggacggcattcggcaaggtgtcgtac
acgttctag
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