Thermostichus vulcanus: NIES2134_120120
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Entry
NIES2134_120120 CDS
T05980
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
tvn
Thermostichus vulcanus
Pathway
tvn00521
Streptomycin biosynthesis
tvn00523
Polyketide sugar unit biosynthesis
tvn00541
O-Antigen nucleotide sugar biosynthesis
tvn01100
Metabolic pathways
tvn01110
Biosynthesis of secondary metabolites
tvn01250
Biosynthesis of nucleotide sugars
Module
tvn_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
tvn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
NIES2134_120120 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
NIES2134_120120 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
NIES2134_120120 (rfbC)
Enzymes [BR:
tvn01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
NIES2134_120120 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
BAY52908
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All DBs
Position
complement(2045513..2046061)
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AA seq
182 aa
AA seq
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MVKVQPLAIADVLLLELQVFRDQRGFFLESYNQRAFMAATGLAVTFVQDNHSASQQGVLR
GLHYQHQHPQGKLIRVIEGKIFDVAVDLRRSSPTCGQWVGTWLSAENFQQLWIPPGFAHG
FWVQSATAQVLYKTTDYYHPGDEYTLLWNDPTVGIQWPIDSEPLLSAKDQQGKSFNELPL
FA
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaggtacaaccgctggcgatcgctgacgttctgctcttggaactgcaggtcttt
cgcgatcagcggggctttttcctagaaagctataaccaacgagcctttatggctgccaca
ggcttggcagtgacctttgtccaagataatcactccgcctcccagcagggggttttgcga
ggactccactaccagcaccaacacccccaaggcaaactgattcgcgttattgaaggaaaa
atttttgatgtcgccgttgatttgcggcgctcttcacccacctgtggccaatgggtggga
acttggttgagtgctgaaaacttccagcaattgtggattccccctggctttgcccacggc
ttctgggtgcaatcagccaccgcccaagtcctctacaaaacaacagactactaccatcca
ggggatgaatataccctactctggaatgacccaaccgttggtattcaatggcccattgac
agcgaacccctcctttctgccaaggatcaacagggcaaatcttttaacgaacttccccta
ttcgcctga
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