Thioalkalivibrio versutus: TVD_09225
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Entry
TVD_09225 CDS
T03959
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
tvr
Thioalkalivibrio versutus
Pathway
tvr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tvr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
TVD_09225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tvr03400
]
TVD_09225
DNA repair and recombination proteins [BR:
tvr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
TVD_09225
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
T7-like_gp67
Motif
Other DBs
NCBI-ProteinID:
AKJ96475
UniProt:
A0A0G3G5D5
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Position
1986812..1989409
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AA seq
865 aa
AA seq
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MQQYLGIKAEYPDTLLLYRMGDFYELFHDDAERAAGLLDITLTRRGESAGQPIPMAGIPV
HTLESYLARLLKLGESVAICEQTGAVGEQKGPVKREVVRIVTPGTVTEEALLEARSINRM
VAVCPAGSAAIKGRKEGYGIASLEFASGQFRLLEVRDATELAAELARLDPVECLIPDQAA
PIPGIEGFAPQRHADWHFDGVSARRVLTTHFGTRDLSGFGCDGLDLGIAAAGALLAYVQN
RHRGDLAHITGLAHELRSQMLVLDPATRRNLELTRTLGGERHGSLLALLDTTRSAMGSRR
LLQWLHQPLRDRAIIRERQTAITGLLEAGATAPLREALAGSADVERILSRIVLGSARPRD
LTALLASLERLPPLHQALTPLAASAASLQALYEALAPEDELSATLAAALVEEPPLRVTDG
GMIRAGFDAELDRLRALENDADSFLREIEAREREATGIPTLKVAYNRVHGYYIEVSRTRS
AELPGRFMRRQTLKNAERYTTEELKRFEDEILSAREQAMARERALFDGLIAELQGRAPGL
RVIADALAELDALACLAERARRLDWHCPELVDTPGIRIEQGRHPVVEAGLDAPFVANDTE
LDPEERRLLVITGPNMGGKSTYMRQTALIVLLACMGSFVPAARAQIGPVDRIFTRIGASD
DLTSGRSTFMVEMTEAANILHNAGPESLVLMDEIGRGTSTFDGLALALACAERLTRHNRA
LTLFATHYFELTALAEREPAVANVHTDAMEHEHSIVFLHQVREGPANQSYGLQVAQLAGV
PADVLKLARQHLRELEDRAAESDSPQLGLFTPKPDPANVAAPEPEPYEAEARALKALFDT
LDPDDMSPREALDALYRMKDALREK
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagtacctcggtatcaaggccgagtacccggatacgctgctgctctaccgcatg
ggtgatttctacgagctgttccatgatgacgccgagcgcgccgcgggactgcttgatatt
accctgacccggcgtggcgaatcggccggacagccgatccccatggccgggatcccggtg
cacacgctggagagctatctcgcgcgcctgctgaagctgggcgagagcgtggccatctgc
gagcaaaccggcgccgtcggggaacagaagggcccggtcaagcgcgaggtcgtacgcatt
gtcacccccggcacggtcaccgaggaggccctgctggaggcccgcagcatcaaccggatg
gtcgcggtgtgccccgccggctcggccgcgatcaagggccgcaaggagggctacgggatt
gccagcctggagttcgcctccggccagttccgcctgctggaggtgcgcgacgcgaccgaa
ctggccgccgagctggcacggctggacccggtggaatgcctgatccccgaccaggccgcg
cccatccccgggatcgagggcttcgccccgcagcgccacgccgactggcatttcgacggt
gtctccgcccgccgggtcctgaccacgcactttggcacccgggatctctccggctttggc
tgtgatggcctggatctcggcatcgccgcggccggcgccctgcttgcctacgtgcagaac
cgccatcgcggggatctcgcgcacatcaccggcctggcgcacgaactgcgcagccagatg
ctggtgctggacccggccacccgccgcaacctggagctgacccgcaccctgggcggcgaa
cgccacggatccctgctggccctgctggacaccacccgctcggcgatgggttcgcgccga
ctactgcagtggctgcaccagccactgcgcgaccgcgccatcatccgcgagcgccagacc
gcgattaccggacttctggaggcgggggccaccgcgcccctgcgcgaggccctggccggc
agcgcggatgtcgaacgcatcctgtcgcgcatcgtcctcggcagcgcccggccgcgcgac
ctgaccgccctgctcgcgagtctcgaacgcctgccgcccctgcaccaggccctgacccca
ctggccgccagcgcggcctccctgcaggcgctgtacgaggccctggcgccggaagacgag
ctgagcgcgaccctggccgccgcgctggtcgaggagccaccactgcgcgtcaccgacggc
ggcatgatccgcgccggcttcgatgccgaactggatcgcctgcgcgcactggagaacgat
gccgactcgttcctgcgcgagatcgaggcgcgcgagcgcgaggccaccggcatccccacg
ctcaaggtcgcctacaaccgggtgcacggctactacatcgaggtctcgcgcacgcgctcg
gcggagctgcccgggcgcttcatgcgccgccagacgctgaagaacgccgagcgctacacc
accgaggaactcaagcgcttcgaggacgagatcctctccgcccgcgagcaggccatggcc
cgcgagcgcgccctgttcgacggcctgatcgccgagctccagggtcgcgccccgggtctg
cgcgtgattgcggacgcgctggccgaactggatgccctggcctgcctggccgagcgggcc
aggcgcctggactggcactgcccggaactggtcgacacgcccggcatccgcatcgaacag
ggccgccacccagtagtggaggccggcctggatgcgcccttcgtcgccaacgacaccgag
ctggaccccgaagagcgcaggctgctggtcatcaccggccccaacatgggcggcaagtcc
acctacatgcgccagaccgcgctgatcgtgctgctggcctgcatgggcagcttcgtgcca
gccgcgcgcgcgcagatcgggccggtggaccggatcttcacccgcatcggggcctccgac
gacctgacctccgggcgctccaccttcatggtggagatgaccgaggccgccaacatcctg
cacaacgcgggccccgagagcctggtgctgatggacgagatcggccgcggcaccagcacc
ttcgacggcctcgccctggcgctcgcctgcgccgaacgcctgacgcgccacaatcgcgcc
ctgaccctgttcgccacgcactacttcgagctgacggcgctggccgaacgcgaaccggcg
gtcgccaacgtgcacacggatgccatggaacacgagcacagcatcgtgttcctgcaccag
gtccgcgaggggccggccaatcagagttacggcctgcaggtagcgcaactggccggggta
ccggccgatgtcctgaagctcgcgcgccagcacctgcgcgagctcgaggaccgcgccgcc
gagagcgactcgccgcaactggggctgttcacgcccaaacccgacccggccaacgtggcc
gcacccgaacccgagccgtacgaagcggaggcacgcgccctgaaggccctgttcgacacg
ctggatccggacgacatgtccccgcgcgaggccctggatgccctctatcggatgaaagac
gccctgcgcgaaaagtag
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