Trametes versicolor: TRAVEDRAFT_159402
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Entry
TRAVEDRAFT_159402 CDS
T04795
Name
(RefSeq) nucleoporin
KO
K14312
nuclear pore complex protein Nup155
Organism
tvs
Trametes versicolor
Pathway
tvs03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
TRAVEDRAFT_159402
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvs03019
]
TRAVEDRAFT_159402
Messenger RNA biogenesis [BR:
tvs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
TRAVEDRAFT_159402
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_N
Nucleoporin_C
Motif
Other DBs
NCBI-GeneID:
19410276
NCBI-ProteinID:
XP_008033093
JGI:
159402
LinkDB
All DBs
Position
Unknown
AA seq
1369 aa
AA seq
DB search
MAFLSSTADQRNFAASSSSGPLLASVSGSKLRQAQGASKPVVVLDLPALQAGSRVLQEQL
VKDSQIIPDLGDMICESGTPSSASYTVFPDDHRAPFQKRRHIGIPESLWQYYTSTNLATH
MGLFPEIDRVWIAIDRNLFLWDYVDGQELSSFVDQPDVITHVALVKPKSGVFIDEITTLL
VICTPITVLLIGVSTTPVPGPNGQTRKEIKMYATDMSIACDVEMSDVVGTPDGRIFMAGS
QDGNLYELHYQEKEGWFGKRVQLINHSVGGVQSLLPRISASNADDRIVSLVSDPARNCFY
SLTARNTISVWRTNGDKHVQHLQTISNLYKATQDKVPGSPALTPQNFSITALHVIEPSES
RSGVQLVAITTNGVRLYFSPGSTYGWNTSAAPGFRSLSLAHVRLPPPNLIHPDEQSKLYR
EGQGAYGLGQGQQQPPSRPCIIKVLEYTSYDLGITLAVQRGDVADTDYLLCMAPDLTQIG
SLGQVRGPQVQQPQPQYVSHAYGAPTQAANRIPLTERATLVPIPGVTWGIAPVPRSKYSM
TTTAPANTPAPLITNELATQFSEPARQYIILTNGGLHWVAKRRAVDALKDAIEEYQVEGN
AQSLIDLRDSYGRDQTCAMLLAIASGNTFLDPMEQSPLGSMSQVSSELAAVARQAFYDFG
ERPTWAERVTYGTSESSGTATFSGRREGLALYFARLVRPFWKVKLTNAGANGLQELGVPD
DILVIAQKNLFALKELLDTNPYLFHSAPGDHTGARSATANEQEAWKAEQSSVSQLLSLLG
RTIEAISFILLLSDHRLGELISHCDPEIQKLVSSLTFEDLITVDKGVTASRALVNVIINQ
QIGQQISVDTISEVLQQRCGSFCSTDDVMLYKARENIRRAVETRNPMERQTWLGESLRLF
MKGARNLEFEKLREICGDYQQLNYAKGAVELPLHCAQAFDTDLQGQEYWTAGCPASDSRA
QFWERRTHCYELVLDSLSVFEERSTSSKPSASDDPETVRGHAYELAFASEDEMFHSTLYD
WLIERGMADELLEMRPAYLEAHLRREPVTVAKFQLLWQFYVKDGQPLRAAEVLAILAEST
DFNLSLDMRLEYLTLAVGNAKSHPVSVGGRHETAIAFLTDLEEKLEVAQVQLELYNTLLP
RQHEPDVVERFKALSLRLYNITELYQLWAEPLDLPLIKLLILHVSQHRDDAIVRPIWNRI
FEEGKSSSFTTEDAEPKVAADRIVSKVIPLGQRYYPSDGAFPLQHIASLLVRFALAHKGD
LPYGWAPRILVQCGVPHPEVWDILHEMYESQVPPFNEQANVQAISSDIAVLLTDWIDEAK
RPQSAAARGDFPVFRIDQAVEQYLAELEPGRTETKAAYEAIKRQLRRHW
NT seq
4110 nt
NT seq
+upstream
nt +downstream
nt
atggcctttctatcctccacggccgaccagcgaaatttcgcggcctcgtcgtcgtcgggg
cccctgctcgcgtccgtcagcgggagcaagctacgacaggcgcaaggcgcgtcgaagcca
gttgtcgtcctcgacctccccgctctccaggcgggcagccgggtcctccaggagcaactg
gtgaaagattcccagataattcctgacttgggtgatatgatatgtgagtccgggacgcca
tcgtccgcgtcgtacactgtattccccgatgatcatcgcgcgccattccagaagaggaga
cacataggaatccccgagagcttgtggcaatattacacctccaccaacctcgccacgcat
atgggattgtttccggaaattgaccgcgtctggatcgccattgaccgcaacttgttcctt
tgggactatgtggatggccaggagctgagctcatttgtggaccaacccgacgtaatcacc
cacgtcgcgctcgttaaacccaaaagtggcgtcttcattgacgagatcaccacactcttg
gtgatatgtactcccatcaccgtactgctcattggtgtgtccacgacgcccgtaccagga
ccaaatggtcagacgcgcaaggagatcaagatgtacgcgacagacatgtctatcgcttgc
gacgtagagatgtccgatgtggtcgggacacccgacggccgtatattcatggccggctcc
caggacgggaatctctacgagcttcattaccaggagaaagaaggctggtttggcaagcgg
gtgcagctcatcaaccattcggtcggtggcgtgcagagtctacttccgcgtattagcgct
tccaatgcggacgacaggatcgtgtccctcgtctccgacccagccaggaattgcttctat
tctctgacggcaaggaacaccatctctgtatggcggacaaacggcgacaagcacgttcaa
catctgcagaccatctcgaacctgtacaaagcgacccaggacaaggttccgggatcgcct
gcattgacgcctcagaacttcagcatcaccgccctgcatgtgatcgagccgagcgagtcg
cgctctggcgtccagctagtggcaatcaccaccaacggcgtgcgcttgtatttctctcct
ggatcgacgtacggctggaatacctctgctgctccgggcttccgcagtctatctctggct
catgtccgccttcccccgcccaacttgatccatccggatgaacagtcgaaactgtaccgt
gaaggacaaggggcttatggtctgggccaaggccagcaacagccaccttctcggccttgc
atcatcaaggttttggaatatacctcctatgacctcggcatcacgcttgctgtgcaacga
ggagacgttgcagataccgattacttgctctgcatggctccggacctaacacagatcggc
tctcttggacaggttcgcgggcctcaggtgcagcaacctcaaccacagtatgtaagccat
gcatacggcgctccgactcaagcagccaaccgaatcccgctcacggaacgtgcaaccctc
gttcccataccaggagtgacttggggcatagcaccagttccgcgctcgaagtactccatg
actacgactgctcctgccaatacccctgcgcccctgatcaccaacgagctcgcaacccag
ttctccgaaccggcaagacagtacatcatcctcacaaatggtgggctgcactgggtcgca
aagcgacgggctgtggatgcactcaaggacgccattgaagagtaccaggtggaaggcaat
gctcagtcactgatagatcttcgtgatagctacggtcgcgaccaaacatgcgccatgctc
ttagcgattgccagcggcaatactttcctggaccccatggagcagtctccgctcggttct
atgagccaggtgagctcggagctggcggctgtcgcaagacaggcgttctacgacttcggt
gaacgcccgacttgggccgagcgggtgacgtacggcaccagcgagagttcaggtacggcc
accttcagcgggcgacgggaagggcttgcgctgtacttcgcgagactcgtacgccccttc
tggaaggtgaaactcaccaatgcaggcgcgaatggactgcaagagcttggcgtcccggat
gatatcctggtcattgcgcagaagaatttgtttgccctcaaggaacttttggataccaat
ccatacctattccattcagcacccggcgaccatacaggagctcgatcggcaactgcgaac
gagcaagaggcatggaaggcggagcaaagttccgtctctcagcttttaagcttgcttggt
cggacaattgaggccatatccttcatcttgctcttgagcgaccacagactgggcgagttg
atatcacactgcgaccccgagatccagaaacttgtcagttctttgacgttcgaggatctc
atcacggtggacaagggcgtcaccgcttctcgcgcgctcgtgaacgtgatcatcaaccag
cagattggccagcagatcagcgttgatactatcagcgaggtcctgcaacaacgatgcggc
tcgttctgcagcacggatgacgttatgttgtacaaggcacgggagaatattcgcagagct
gtcgagacccgaaaccccatggagcgccaaacatggcttggggagtccctgaggctgttc
atgaagggtgctcgcaatctggagtttgagaagctgcgcgaaatctgcggtgactaccaa
caactgaactatgccaagggcgctgtggagcttcctttgcattgtgcgcaagcgttcgat
accgacctccagggtcaggaatattggactgctggttgccctgcgtcggactcgcgtgca
caattctgggagcgacggacgcactgctatgagctcgtgttggactcgctctcggtgttc
gaagagcgaagtacgtccagcaagccaagcgcctcggacgacccagagactgtcagggga
catgcgtatgagctggcgtttgcgagcgaggacgagatgttccactcgacgttgtacgat
tggctcatcgagcggggaatggcagacgaacttctggagatgcgtcctgcatacctcgag
gcccacctgcgacgagagcctgtgacagtcgcgaagttccagctgctatggcaattctac
gtcaaggacggtcaacctcttcgtgctgcggaggttcttgctatattggcagagtccacc
gacttcaacctctctctcgacatgcggctcgagtatcttacccttgctgtgggcaacgcg
aagtcgcacccagtgtccgttggtggacggcacgagacggcgatcgccttcctcaccgat
ctcgaagagaagctggaggttgcccaagttcagctcgaattgtacaacacactgctaccc
cgtcagcatgagcctgacgtcgtagagcggttcaaggccctgtcgttgcgtctgtacaac
atcaccgagctgtaccagctctgggcggagcctctcgatctgcctctcatcaagctcctc
atcctccatgtctcccagcaccgcgacgatgccatcgtgcggcccatctggaacaggata
tttgaggaaggcaagtcatcgtcgttcacaaccgaggatgccgagccaaaggttgccgca
gatcgcattgtgtcgaaagtcataccccttgggcagcgatactacccctccgacggtgcc
ttccccctacaacacatcgcatcgcttctcgtccgcttcgcactcgcccacaagggcgat
ttgccgtacggatgggcaccgcgcattctagtgcagtgcggtgttccacacccagaagtg
tgggatatcttgcacgagatgtacgagtcccaggtaccaccgttcaacgagcaggcgaac
gtacaggcgatctcctctgacattgccgtattgttgacggactggatcgacgaggcaaaa
cgcccgcaatccgctgcggcccgcggcgacttccctgtcttccggatagaccaggctgta
gagcagtaccttgcagagttggagccgggacggacagagacaaaagcggcgtacgaagcg
atcaagcgacagctccgccgccactggtag
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