Trametes versicolor: TRAVEDRAFT_74031
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Entry
TRAVEDRAFT_74031 CDS
T04795
Name
(RefSeq) pectin lyase-like protein
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
tvs
Trametes versicolor
Pathway
tvs00040
Pentose and glucuronate interconversions
tvs01100
Metabolic pathways
Module
tvs_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
TRAVEDRAFT_74031
Enzymes [BR:
tvs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
TRAVEDRAFT_74031
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Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-GeneID:
19419880
NCBI-ProteinID:
XP_008042312
JGI:
74031
LinkDB
All DBs
Position
Unknown
AA seq
408 aa
AA seq
DB search
MLANFVALLFLSALAVARRTCKVPAIGGGEDDGPAINAAFERCSKNAKVVLDKYYVVDTL
LLTKDLDDVEIELSGTVQYTPDIAKWSPQSLFLVYQNATTFWFLSGNNIHLYGGGTLDGN
GQVWWDTFNNSHNAGTAGGSSTTFARPIPLTVGNSSNIVVENIRQIGSPFWNNFVYQSTN
VTYKQISIRSQSYSSSPTANSDGWDIYRSSHVTIQDSVVINDDDCVSFKPNSTDIIVANM
FCNGSHGVSVGSLGQYAGEMDIVANVSVTNITMLNAQNGARIKVFGGNPSPISTAGGGTG
FVRNITFKDFHMENVDNPILIDQCYMTSADVCAQFPSNLSISDVHYINVTGTSSGKEGAV
VVDIECSDTCQDITAEDTHLSSPSGNATFVCKNIASTAQLDFNCTLPQ
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgctcgcgaacttcgttgctttgctctttttgtcagctcttgccgtcgcacgcaggacc
tgcaaggtacctgctattggcggaggcgaagacgacgggcctgccatcaacgccgcgttc
gagaggtgctcaaagaacgcgaaggtcgtcctcgacaagtactatgtcgtagatacgctg
ctgctcacgaaggatctcgacgacgttgagattgagctgagtggtacagttcagtataca
ccggacatcgccaaatggtccccccagagcttgttcctcgtatatcagaacgcgaccacc
ttctggttcctgtctggcaataatatccacttgtacggcggtggaaccctcgacggtaac
ggacaagtttggtgggacaccttcaacaactcccataacgctggaacggcgggcggctcc
tcaacgacgtttgcgaggcccatcccgctcacagtcggcaactcctccaacatcgtggtt
gaaaatatccgacagattggctctccgttctggaacaatttcgtgtatcagagcacgaat
gtgacctataagcagatcagcatccgttcacagtcatattcaagcagcccaactgcgaat
tctgatggctgggacatctaccgttcttcgcatgtcactatacaggattccgttgtgatc
aacgacgacgattgtgtttcgttcaagccgaatagtaccgatattatcgtggcgaacatg
ttttgcaacggctctcatggcgtctctgttggcagcttgggccagtacgccggcgaaatg
gacatcgtcgccaacgtgtccgtgaccaacatcacgatgctcaacgcccaaaacggtgcg
cgcatcaaggtcttcggggggaatccgagccccatcagcacggccggcggtggcactgga
ttcgtgaggaatatcacgttcaaggacttccacatggagaacgtcgataaccctattctt
atcgaccagtgctacatgacttctgcggacgtctgcgcccagttccccagcaacctcagc
atctccgacgtccactacattaacgtaaccggcacctcctccgggaaggagggtgcggtc
gtagtcgatatcgagtgctcggacacgtgtcaagatatcaccgctgaggacacgcacctg
tcgtcgccgagtggtaatgcgacgtttgtgtgcaagaatatcgctagcaccgcgcagctc
gacttcaactgcacgttgccccagtga
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