Thermoanaerobacter wiegelii: Thewi_0084
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Entry
Thewi_0084 CDS
T01607
Name
(GenBank) alpha amylase catalytic region
Organism
twi
Thermoanaerobacter wiegelii
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
SLH
CBM_20
Alpha-amylase_N
Glucodextran_B
Cadherin-like
DUF5060
GlgE_dom_N_S
fn3
Motif
Other DBs
NCBI-ProteinID:
AEM77594
UniProt:
G2MUS1
LinkDB
All DBs
Position
89371..94902
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AA seq
1843 aa
AA seq
DB search
MFKRRALGFLLAFLLVFTAVFGSMPMEFAKAETDTAPAIANVVGNFQSKLGDSDWNINSA
KTIMTYKGNGFYEFTTPVALPAGDYEYKVALNHSWEGGGVPSQGNLSLHLDSDSVVTFYY
NYNTSSVTDSTKYTPIAEEKLPRIVGTIQSAIGAGNNWDPASSTAIMRDYKFNNVYEYTA
NVPKGNYEFKVTLGPSWDINYGLNGEQNGPNIPLNVVYDTKITFYYDSVSHNIWTDYNPP
LTGPDNNIYYDDLRHDTHNPFFRSPFGAIKTGDTVTLRIQARNHDLESAKISYWDDIKKI
RIEVPMYRIGQSPDGKYEYWEVKLSFDHPTRIWYYFILKDGTKTAYYGDNDEQLGGVGKA
TDTENKDFELTVYDKNLDTPDWMKGSVMYQIFPDRFFNGDSSNDHLKKYSRGFDPVEYHS
NWYELPDNPNDKNKLGYTGDGIWSNDFFGGDLKGIDDKLDYLKSLGISVIYLNPIFQSPS
NHRYDTTDYTKIDELLGDLSTFKKLMEDAHAKGIKVILDGVFNHTSDDSIYFDRYGKYLN
TGVLGAYQAWKQGDQSKSPYGDWYELKPDGTYEGWWGFDSLPVIRQINGSEYNVKSWADF
IINNPNAISKYWLNPDGDKNAGADGWRLDVANEVAHDFWVHFRDAINNEKPNAPMIAELW
GDASLDLLGDSFNSVMNYLFRNAAIDFILDKSFDDGNVVHNPIDAAKLDQRLMSIYERYP
LPVFYSTMNLLGSHDTMRVLTVFGYNSADNSQNSQAAKDLAVKRLKLAAILQMGYPGMPS
IYYGDEAGQSGGKDPDNRRIFPWGREDTDLQTFFKKVVNIRNDNQVLKTGDLETLYANGD
VYAFGRRIINGKDTFGKSYPDSVAIVVINKGDAKQVSIDTTKFIRDGVAFTDALSGKTYT
VQDGKIVVEVGSMDGAILISDPEQNLTAPQPITDLKAVSGNGKVDLSWSVVDKAVSYNIY
RSTVKGGLYEKIASNVTQTTYTDTEVTNGLKYVYAVTAVDSDGNESDLNNEIEAYPAFPI
GWAGNMNQVDTHVIGVNNPVEVYAEVWAEGLTDKPGQGENMIAQLGYRYIGDGGQDATRN
KVEGVEISKDWTWVDAQYVGDSGNNDKYMAKFVPDMVGTWEYIMRFSSNQGHDWTYTKGP
DGKTDEAKQFTVVPSNDVETPTAPVLQQPGIESSRVTLNWSPSADDVAIYGYEIYKSSSE
TGPFIKIATVSDSVYNYVDTDVVNGNVYYYKVVAVDTSYNRTASNTVKATPDIIPIKVTF
NVTVPDYTPDDGVNIAGNFPDAFWNPSAQQMTKTGPSTYSITLTLNEGTQIEYKYARGSW
DKVEKGEYGNEIDNRKITVTNQGSNTMVVNDTVQRWRDLPIYIYSPKDNTTVDANTSEIE
IKGNTYKGAKVTINDESFVQQENGIFTKVVPLEYGVNTIKIHVEPSGDKNNELTKDITIT
VTREEPGQETEPTPTPPTETTKPSQEVSQGKVVVENNTTTLTIDENKVAKDIKDTSKKEI
QFDLTNIGTTPQKALEIPVTVLNLIAENNKNVVVKSDEVALQFDAKTLGVSQEAIDLINK
AGTIKLNIHNKGKKEASSFEPITSAYDITIKAGDKDIKIGSPVKMTFNIKGAKDIRKVGV
YYLNEKTNQWEYVGGKVDKGTNTITFEAKHFSTYEVFEYNKEFKDVTKDNWAYDVVNVLA
SRHIIKGVDSETFVPNAKITRAEFAALMIRALGIEEEPYQGEFNDVKEGAWYANAIEAAY
KAGIMLGDGKNMRPDDPITREEMTAVIMRVYGKLAEYKEDSIGNTTFSDNNKISEWAKNV
VANAVKLGIVRGYEDNTFKPKDNATRTEAAAMLYRILEKTGNI
NT seq
5532 nt
NT seq
+upstream
nt +downstream
nt
gtgtttaaaaggagagctttaggatttttgctggcttttcttttagtttttacagcagta
tttggctcaatgcctatggaatttgcaaaggctgagacagatacagcgccagcgatagcc
aatgttgttggcaattttcaatccaaacttggagattctgactggaatataaacagtgcc
aaaacgataatgacatataaaggtaatggcttttatgaatttactaccccagttgcgtta
cctgcaggtgattatgagtataaagttgctcttaatcattcatgggaaggtggaggagtt
ccttcacaaggtaatttaagcttgcatcttgattcagattctgtagtgactttttattac
aattacaatacttcaagtgttaccgattccacaaaatatacaccaattgctgaagaaaaa
cttccgagaattgtgggcactatacaatcagcaataggagcaggtaataactgggaccct
gcctcatctactgctataatgagggattataaatttaacaatgtttacgaatacactgca
aacgttccaaaagggaattatgaatttaaagtgactttagggccctcatgggatataaat
tatggcttaaatggtgaacaaaatgggccaaatattcctttgaatgtggtctatgatact
aagattacattttactatgattcggtttcacataatatatggacagattataatccacct
cttacaggacctgataataacatatattatgacgatttaagacatgacacccataaccca
ttcttccgctcgcctttcggtgcgataaaaacgggagatactgtgacattaagaatacaa
gcaaggaaccacgaccttgagtcagctaaaatttcttattgggatgatattaagaaaata
agaatagaagtccctatgtacagaattggtcaaagtcctgacgggaaatatgaatactgg
gaagttaagttaagctttgaccatcccacaagaatttggtattactttatacttaaagac
gggaccaaaactgcttattacggagataacgatgaacaattaggtggcgtaggtaaagcc
acagatacagaaaataaggacttcgaacttactgtctacgataaaaacttagacacccct
gattggatgaaagggtcagtaatgtatcaaatattccctgataggttctttaatggggat
tcttcaaatgaccatctaaagaaatacagcagaggttttgatcctgttgaatatcatagc
aactggtacgagcttccagataatccgaatgataaaaataaactaggatatacaggggat
ggcatatggtcaaatgacttctttggcggtgatttaaaaggtatagatgataaattggat
tatttaaaaagccttggaatatcagtcatttatctcaatccaatttttcaatcaccttct
aatcacaggtacgatacaaccgattacacaaaaatagacgaactattaggagatttatct
acctttaagaagctcatggaggatgcccatgcaaaagggattaaggtaatacttgatggc
gtcttcaatcatacaagtgatgacagcatttattttgataggtatggtaaatacttaaac
acgggagttttaggtgcttatcaagcatggaaacagggagatcagtcaaagtctccatat
ggtgactggtatgagctaaagcctgacggtacctatgaaggatggtggggatttgacagt
ttacctgtgataaggcagataaacggcagtgaatataatgtcaaaagttgggcggatttt
attataaataatcctaatgcaatatctaagtattggttaaatcctgatggggacaaaaat
gcaggtgcagatggttggagattggatgttgcgaatgaagttgctcacgatttttgggtt
cattttagagatgcaattaataatgagaaaccaaatgcgccaatgattgccgaactttgg
ggagatgcttcattagatttgcttggagactcttttaactctgttatgaattaccttttt
agaaatgcagcaattgattttatattggataaatcatttgatgacggaaatgtggttcac
aatcctatagatgcagcaaaacttgaccaaaggcttatgagcatatatgagagatatcct
cttccagtgttttattctactatgaatcttttaggttctcatgacaccatgagagtattg
acagtatttggatacaactctgccgataatagtcaaaattctcaagcagcaaaagacctt
gcggttaaaagacttaaacttgctgcaatactgcaaatgggttatccaggcatgccttct
atttattacggagatgaagcaggacaatctggcggaaaagacccggacaacagaaggata
ttcccttggggaagagaagatactgatttgcaaacttttttcaagaaagttgtaaatata
agaaatgacaatcaagttttgaaaacaggagaccttgagacactttatgcaaatggcgat
gtttatgcctttggaagaagaatcataaatggaaaagatacttttgggaaatcgtaccct
gacagtgtagctattgttgtaataaataaaggtgacgcaaaacaggtttctatagatacc
actaaatttataagagatggagttgcttttacagatgccttaagtggcaagacatacacg
gttcaggatggtaaaattgttgtagaagttggatcaatggatggggcaatactcatttca
gatccagagcaaaatttgacagcacctcagccaataacagaccttaaagcagtctcaggg
aatggcaaagtagacctttcctggagtgtagtagataaagcagtaagctataatatttac
cgttctacagttaaaggtgggttatatgaaaaaatagcttcaaatgttacgcaaaccacc
tatactgatacagaggttaccaatggtctaaagtatgtgtatgctgtaaccgctgtagat
agtgatggaaatgaaagtgatttaaacaatgaaattgaggcatatccagcatttcctatt
ggctgggcaggaaatatgaaccaagttgatacccatgtaataggcgtaaataatccagtt
gaagtgtatgccgaagtgtgggcagaaggattaacagataaacctggccaaggggaaaat
atgattgcccagttaggatataggtatattggagatggtgggcaagatgctacacgcaac
aaagtggaaggtgttgaaataagtaaggactggacatgggttgatgcacaatatgtaggg
gattctgggaataatgataaatacatggctaaatttgtacctgatatggtaggcacatgg
gaatacattatgagattttcttctaaccaaggccatgattggacgtatacaaaaggacca
gatgggaaaacagatgaagcaaaacagtttactgtcgtgccatcaaatgatgtagaaaca
cctacagctccagtcttacaacaaccaggaattgaatcctcaagagttacacttaattgg
agtccgtcagctgatgatgttgctatttacggctacgaaatctataagtcttcaagtgag
acaggaccatttataaagattgcaactgtgtctgacagtgtgtataactacgtagataca
gatgtagtaaatggcaatgtgtattattataaagttgtggcagttgatacctcctataat
aggacagcatcaaatacagtaaaagcgacacctgacataatacctataaaagtgacattt
aatgtcacagtaccagattatactcctgatgatggtgtaaatattgctggaaacttcccg
gatgctttctggaatccaagtgctcagcaaatgacaaagacaggacctagcacatacagc
attaccttaactttaaatgaaggtacacaaattgaatataaatatgcgagaggaagctgg
gataaagtagaaaaaggtgaatacggcaatgaaattgacaataggaagataactgttacc
aatcaaggttcaaatacaatggtagtaaatgatacagtgcaaagatggagagatttgccg
atatatatctattctccaaaagacaacactactgttgatgcaaatacgagtgaaatagag
attaaaggcaatacttacaaaggtgcaaaagtaactataaatgatgaatcttttgtacaa
caagaaaatggtatatttacaaaagtagttcctttagaatatggtgtaaatactatcaaa
atacatgtagagccaagtggtgacaagaataatgaacttacaaaagatataacaataact
gttacaagagaggagcccggccaggagacagaacctactcctactccaccaacagaaaca
acaaaaccatctcaagaagtatcacaaggcaaagtagttgtagaaaataacacaacaaca
cttacaatagacgaaaacaaagtagcaaaagacataaaagacacttcaaagaaagaaata
caatttgacttaacaaatataggaactacacctcaaaaagcattagaaatacctgtaact
gtacttaatttaatagcagagaacaacaaaaacgtagtagtaaaatcagacgaagtagct
cttcaatttgatgcaaaaactttgggagtatcacaagaagcaattgacctcataaacaaa
gcgggaacaataaaacttaacatacacaacaaaggcaaaaaggaagcatcatctttcgag
ccaataacaagcgcctatgacataacaataaaagcaggagacaaagacataaaaataggg
tcaccagtaaaaatgacatttaacataaaaggtgcaaaagacataagaaaagtaggagta
tactacttaaacgagaagacaaatcaatgggaatacgtaggaggaaaagttgacaaagga
acaaacacaataacctttgaagccaaacacttctcaacctatgaagtctttgaatacaac
aaagaattcaaagacgtaacaaaagacaattgggcatatgacgtagtaaatgtccttgca
tcaaggcacataataaaaggagtagacagtgaaacatttgtaccgaacgcaaaaataaca
agagcagaatttgcagcattaatgataagggcattaggaatagaagaagagccgtaccaa
ggagaattcaatgacgtaaaagaaggagcatggtatgctaacgcaatagaagcagcatac
aaagcagggataatgttaggagacggcaagaatatgaggccggatgacccaataacaaga
gaagagatgacagcagtaataatgagggtatacggaaagcttgcagagtacaaagaggac
agtatagggaataccactttcagtgataacaacaagataagcgaatgggcaaagaatgta
gtagcgaatgcagtaaaacttggaatagtaagaggatatgaagataacactttcaagcca
aaagacaacgctacaagaacagaggcagcagctatgctttacagaattttagagaaaaca
ggaaatatataa
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