Tripterygium wilfordii (thunder duke vine): 119980487
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Entry
119980487 CDS
T07256
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03013
Nucleocytoplasmic transport
twl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119980487
09122 Translation
03013 Nucleocytoplasmic transport
119980487
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
twl03019
]
119980487
03041 Spliceosome [BR:
twl03041
]
119980487
Messenger RNA biogenesis [BR:
twl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
119980487
Spliceosome [BR:
twl03041
]
Complex C
Other components
EJC/TREX
119980487
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
119980487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Motif
Other DBs
NCBI-GeneID:
119980487
NCBI-ProteinID:
XP_038679120
LinkDB
All DBs
Position
16:726741..734713
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AA seq
610 aa
AA seq
DB search
MEVLKSAILQPGSVENFALQTVQEVIKPQRPTKLAQDENQLLENMLRTLLQELVSAAVQS
GEQIMQYGQSIDDVENAQGQIPRLLDFVLYLCEKEHVEGGMIFQLLEDLTEMSTMRNCKD
IFGYIESKQDVLGKQELFARGKLVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSE
RSAVNIKGVFNTSNETKYEKEPPDGIAVDFNFYQTFWSLQEYFCNPASLPLAPNKWQKFT
SSLMVVLNTFEAQPLSDEEGNTNNLEEEAATFNIKYLTSSKLMGLELKDPSFRRHVLVQC
LILFDYLKSPGKHDKDVASDSMKEEIKSCEERVKKLLEVTPPKGKDFLRSIEHILEREKN
WVWWKRDGCPPFEKQPTEKKAVQEGPKKRRPRWRLGNRELSQLWKWADQNPNALTDPQRV
LTPASTEYWKPLAEDMDPAAGIEAEYHHKNNRVYCWKGLRLAARQDLEGFSRFTDHGIEG
VVPLELLSPDVRTKYHNKPSDKSKRAKKEETMNASQQAEENQIATPASEIDGEAIRTDLE
AAAAPMDTDATTAIGNISQGGTPTPEENQKQSPDTDVGQESAQLEADAEVDVGLDGETDP
EAEVELDTAG
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggaagtattgaaaagtgctatactgcagccagggtcagtggagaatttcgccctccag
acagttcaagaagtgataaagcctcagagaccaacgaaattagcgcaagatgagaaccaa
ttgttggagaatatgcttcgtacattgcttcaggagttggtgtcagctgcggtgcagtca
ggggagcagataatgcagtatgggcaatcaatcgatgatgtggagaatgcccaaggccaa
attcctcgtcttctagactttgtattgtatctttgcgagaaagaacatgttgaaggtggt
atgatattccaactactcgaggacttgactgaaatgtctacaatgagaaattgcaaggat
atttttggctacatagagagtaaacaagacgtattagggaagcaagagctgtttgctcgt
ggaaaactagtgatgttgagaacatgcaatcaacttcttcggcgcctgtcaaaggcaaat
gatgtagtattttgtggacgaattctcatgttcctggctcattttttcccattgtctgaa
cgttcagctgttaatataaaaggagtttttaacacgtcaaatgagacaaaatacgagaag
gagccaccagatggcattgcggttgacttcaacttttatcagaccttttggagtttgcaa
gaatatttttgtaaccccgcttctctcccgcttgctcctaacaagtggcaaaaatttaca
tccagtttgatggttgtgttgaatacatttgaagctcagcctttgagtgatgaagaggga
aacactaataatttggaggaagaggcagcaacttttaatattaaatatcttactagtagc
aaactaatgggattagagttaaaagatccaagtttccgacgtcatgttcttgtgcaatgc
cttattttatttgactatttgaagtctcctggaaaacatgacaaagatgtggcatctgat
agcatgaaggaagaaataaaatcttgcgaggagcgtgttaagaaattacttgaagtaact
cctcccaaagggaaagattttcttcgtagtattgagcatatattagagcgtgaaaagaat
tgggtttggtggaaacgtgatggttgcccaccatttgaaaagcaacctacagagaagaaa
gctgtccaagagggacctaaaaaacgtaggccaaggtggagactgggaaatagggaactc
tctcagttgtggaaatgggctgatcaaaacccgaacgctttgactgatcctcaacgtgtt
ctaactccggcaagcacagagtattggaaaccactggctgaagatatggacccagcagct
ggaatagaggctgagtaccaccacaaaaataatcgggtttactgctggaaaggtcttcga
ttggctgctcgtcaagacttggaagggttttctagatttactgatcatggtattgaaggg
gttgttcctctagagcttttgtcacctgatgttcgaaccaagtaccataataaaccgagc
gacaaatctaaacgtgccaaaaaagaagagacgatgaatgcttcacagcaagctgaagaa
aatcagattgcaacccctgctagtgaaattgatggtgaggcgattagaaccgatcttgaa
gccgcagcagcaccaatggacactgatgccacaactgctattggcaatatatcccaaggt
ggaactccaacaccagaagaaaatcaaaagcaaagccccgacacagatgtcggtcaagag
tctgcccagttagaagctgatgctgaagtagatgttgggttggatggagagacagaccca
gaagctgaggtagagttagatactgcaggttga
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