Tripterygium wilfordii (thunder duke vine): 119984972
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Entry
119984972 CDS
T07256
Name
(RefSeq) serine/arginine-rich splicing factor SR45-like isoform X1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03013
Nucleocytoplasmic transport
twl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119984972
03015 mRNA surveillance pathway
119984972
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
twl03019
]
119984972
Messenger RNA biogenesis [BR:
twl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
119984972
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
Nup35_RRM_2
RRM_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
119984972
NCBI-ProteinID:
XP_038685037
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Position
19:10664913..10671279
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AA seq
422 aa
AA seq
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MAKPKRVRRSPPSGSVSGSSTRSRSRSRSSSSTGSGSRSTSRSRSLSRSRSRAKSFSSSS
SSPSRSAGSRSRSPPRRKSPPDVPKRGRSPPPPSKKSPPPRKVSPIRESLVLHIDSLSRN
VNEGHLKEIFSNFGEVVNVELAMDRNVNLPRGYGYVEFKSRADAEKALLHMDGAQIDGNV
VRAKFTLPPRQKLSPLPKAIPSAPKREAPKTDADIEKDVPKRQRESASPQRKPLPSPRRR
SPVGRRGVSPKRHPDSPPRRRAESPVRRRVESPYRRGETPPRRRPASPPRGRSPSPRRRQ
RSPARPSPRRVRGSPIRRRSPLPPPRRRSPPRRARSPPRRSPFSRRRSRSPIRRPLRSRS
PSISPRRGRAPPVRRGRSSSYSGSPSPRKVTRRISRSRSPRRPLRGRSSSKSSSSTSPPR
KP
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagccgaaaagagtccgccgctcgccgccttccgggtccgtttcgggctcatca
actcggtctaggtcccgttcccgatctagttcctcgactgggtcaggttctcggtccacc
tctcggtctcgatcgttgtcgcgctctaggtcccgcgccaaatccttttccagctcgtct
tcctccccttctcggagtgccggctctcgtagccgtagccctcctcgtcgcaaaagtcct
cctgatgtacctaagcgaggtcgctccccacccccgccatctaagaaatctccgcctcca
aggaaagtctctcccattcgtgaatctctcgttcttcacattgactcgctcagcaggaat
gtgaatgaaggtcatttgaaagaaatattcagcaacttcggcgaagttgttaatgtggag
ctggcaatggaccgcaacgttaatcttccaagaggatatggttatgttgagttcaagtct
agagcagatgcagagaaagccctgttgcacatggatggagcccaaattgatgggaatgtt
gttcgagcaaagttcactttacctccacggcaaaagctttccccactgccaaaggccatt
cctagtgctccaaaaagagaggcaccaaaaaccgatgctgatatcgagaaagatgtgcct
aaacggcagagagaatcagcatcgcctcagagaaaacctctaccttcaccaagaagaaga
tctcctgtaggtcgaagaggtgtatctccgaaacggcaccctgattctcctccacgacga
cgtgctgaatctcctgttcgtcgtcgggtagagtccccttatcgtcgtggtgagacacct
cctaggcgcagacctgcatcaccaccaagaggtcgttctccatctcctcggaggcggcaa
agatcacctgcaaggccctctccccgaagggtacgtggcagtcccattcgtagacgttcg
cctctacccccacccagacgccgttcacctcctagaagggcccggagtccaccaagaagg
tcaccattcagtcgtaggcgtagccgttctccaattcgtcgacctcttcgctcgcgttca
ccatctatctcacctcgaagaggccgagcaccacctgtgagacgcgggaggtcttcttca
tactcaggatctcctagtccacgcaaggtaacccggagaatctcaaggagtcgcagtcct
agaaggcctttgagaggaagaagtagtagcaagagcagcagcagtacttcaccacctcgt
aagccatag
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