Tripterygium wilfordii (thunder duke vine): 119985953
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Entry
119985953 CDS
T07256
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03022
Basal transcription factors
twl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119985953
09124 Replication and repair
03420 Nucleotide excision repair
119985953
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
twl03021
]
119985953
03400 DNA repair and recombination proteins [BR:
twl03400
]
119985953
Transcription machinery [BR:
twl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
119985953
DNA repair and recombination proteins [BR:
twl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
119985953
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
Tfb4
IBR
VWA_3
Motif
Other DBs
NCBI-GeneID:
119985953
NCBI-ProteinID:
XP_038686375
LinkDB
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Position
19:3044560..3051765
Genome browser
AA seq
417 aa
AA seq
DB search
MNNNDKAKQLNGETEEDDDDEIDQEEGLDAWEKAYVDDRSWESLQEDESGLLRPIDNAVI
QHAQYRRRRLRSLSSFSAARIQKGLIRFLYIIIDLSRAASATDFRPSRMVTVARNVEAFI
REFFDQNPLSQIGLVTIKDGVAHSLTDLGGSPESHVKALMGKLECSGDSSLQNALDLVHG
YLNPIPSYGHREVLILYSALSTCDPGDIMETIQQCKQSKLRCSVIGLGAEMFICKHLCQE
TGGSYSVALDESHLKELIMEHAPPPPAIAEFAIANLIKMGFPQRAAEGSISICSCHKEAK
VGEGYICPRCKARVCELPTECRICGLTLVSSPHLARSYHHLFPIAPFDEISSSRQFDPKL
KGQRSCFGCQQSLLNPGNKPGPCVTCPQCKQYFCLDCDIYIHESLHNCPGCESFKHK
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacaacgataaagcaaaacagttgaatggtgaaacagaagaagatgatgacgac
gaaattgatcaagaagaagggcttgatgcttgggagaaagcttacgtggacgaccgatct
tgggagtctctccaagaggacgagtctgggcttctacgccccattgacaacgccgtcatt
caacatgcccagtatcgccgccgtcgcctccgctccctttcttccttttctgctgctcgt
atccagaagggcctcattcgatttctctacattattatcgatctttccagggcagcttca
gcgactgattttcgaccaagtcgaatggtaactgttgcaagaaatgttgaggctttcatc
agggagttctttgaccagaatccattgagtcaaattggtttggtcactattaaagatggt
gttgctcattccttgacagatcttggtggctctcccgagtcccatgtcaaagccttaatg
ggtaagctggaatgctcaggcgattcctccctgcagaatgccctcgatctagttcatgga
tatctcaatccaatcccttcatatggtcatcgtgaagttctgattttatattcagctctc
agtacttgtgatcctggagatataatggagacaatccagcaatgtaagcagtctaaatta
aggtgttcagttattggccttggtgctgaaatgttcatatgcaagcatctctgccaggaa
acaggtggatcatactctgttgcattggatgagtcccatctgaaagagttgatcatggag
catgcacctccacctcccgcaattgcagaatttgcaattgctaatttgatcaagatgggt
ttcccacaaagagcagcagagggttctatttctatatgctcatgccataaggaagctaag
gttggagaggggtacatttgtccaagatgcaaagcacgtgtatgtgaacttccgactgaa
tgtcgaatttgtgggttgacacttgtttcttcacctcatttggcaaggtcgtatcatcat
ttgtttcctatagcaccatttgatgaaatttcttcgtcacgacaatttgacccaaagcta
aaaggacagagaagttgttttggttgccaacaaagccttctcaatcctggaaacaaacct
ggtccttgtgtcacttgcccgcaatgcaaacagtacttttgcctcgattgtgacatctat
attcatgaaagcttgcacaactgcccaggctgcgagagcttcaagcacaaataa
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