Tripterygium wilfordii (thunder duke vine): 119986027
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Entry
119986027 CDS
T07256
Name
(RefSeq) WD repeat-containing protein RUP2-like isoform X1
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl04120
Ubiquitin mediated proteolysis
twl04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119986027
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
119986027
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
twl04121
]
119986027
Enzymes [BR:
twl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119986027
Ubiquitin system [BR:
twl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119986027
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
119986027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_like
YNR034W-A-like
Motif
Other DBs
NCBI-GeneID:
119986027
NCBI-ProteinID:
XP_038686485
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Position
19:13546492..13551648
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AA seq
420 aa
AA seq
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MGAFNWSRAPKISNHTTIFFSSYGWEMKNLFSEDFHQTREVQNQTQQEIENTGVENEQER
ARCEWDFKLSAAVSSSTTGAVSDVLGVIEVDPSDSIVATSGIARKIRIYSINSLLASESS
EETLLLDHATACDYYICTPAKLSSLRWRPGSGQRVIGSGDYDGVVTEYDLERRVPIFERD
EHGGRRVWSMDYSHCDPVVGASGSDDGTMKLWDPRCDDGNCVATVQPSLSRSPVCCVEFN
PFGGTLIAVGCADKRAYGYDFRMTREPLIVFDGHLKAVSYVRFLDMNTIISAGTDGCLKL
WDLQDSHVIRTYRGHVNNRRFVGLSVWKSGGLIGCGSESNQVFVYDKRWGEPIWVHGLEP
LEPVMSRAGLDEGGWISSVCWRQVGEGQCSLIAGRSDGVLQVFMGKRKSSSSDTNKVIRL
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgggagcctttaattggtccagagccccaaaaatctccaaccataccaccatcttcttc
agttcttatggatgggaaatgaagaatttattctcagaagactttcatcaaacacgagaa
gtgcaaaaccaaacacaacaggagatagaaaatacaggtgtagagaacgaacaagagcga
gcgagatgtgaatgggatttcaaactctctgccgccgtatcttcaagcactacaggagcg
gtctccgatgtgcttggagtgatcgaagtcgacccatcagatagcatcgtggccaccagc
ggaatcgcgagaaagattagaatttacagtataaactccttgttagctagtgaaagtagc
gaagagactcttctgttagaccatgccacggcatgtgactactacatatgtacaccagcc
aagctcagtagcctcaggtggagacccgggtccggccaacgggtcataggatccggagac
tacgacggggtggtcacagagtacgatcttgaaagaagagtacccatttttgaacgcgac
gagcatggcgggcgccgggtttggagcatggactattcccattgtgatcccgtcgttggc
gcttccgggtcggacgacggaaccatgaaactttgggacccacgttgcgacgacgggaat
tgtgtggctacggtgcagcctagcctgtcacgtagtcccgtgtgttgcgtcgagtttaac
ccattcggcggtacattgatagccgtcggatgcgcagacaagcgtgcatacggatacgat
ttccggatgacaagggagcctcttatagtgttcgacgggcacctgaaagcggtgtcgtac
gtccgattccttgatatgaatacaataatttccgccggaaccgacggttgtttaaagcta
tgggatttacaagattctcacgtgattcgcacgtatagagggcacgtgaacaaccgaaga
ttcgttgggttatccgtatggaagagtggtgggcttatcggatgtgggtctgagagtaat
caagtttttgtgtatgataagagatggggtgagcccatatgggttcatgggctcgagcca
ctcgaaccagtgatgtctcgagctgggttggatgaaggtgggtggattagtagtgtgtgc
tggagacaagttggagaggggcagtgttcacttattgcaggtagatcagatggcgttttg
caggtttttatgggcaaaaggaagtcgtcttcttctgatacaaataaagtcattcgattg
taa
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