Tripterygium wilfordii (thunder duke vine): 119988991
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Entry
119988991 CDS
T07256
Name
(RefSeq) polyadenylation and cleavage factor homolog 4-like
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119988991
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
twl03021
]
119988991
03019 Messenger RNA biogenesis [BR:
twl03019
]
119988991
Transcription machinery [BR:
twl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
119988991
Messenger RNA biogenesis [BR:
twl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
119988991
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
zf_UBZ
Motif
Other DBs
NCBI-GeneID:
119988991
NCBI-ProteinID:
XP_038690197
LinkDB
All DBs
Position
21:complement(13984253..13991211)
Genome browser
AA seq
1037 aa
AA seq
DB search
MESGKILVSRENPRSFLFGSTSAAKAMSNEVSLKPTQPTPILDRFRVLLKQRGNEARVSS
QDDGVPPPSMEEIVQLYELVLGELTFNSKPIITDLTIIAGEQREHGGGIANAICARIMEA
PVDQKLPSLYLLDSIVKNIGREYVRYFSSRLPKVFCEAYSQVDPNLHPSMRHLFGTWSTV
FPPSVLGMIETQLKFSSSVNNQSSGFTPLRSSQSPQPTHGIHVNPKYLRQLDHSTANTSI
QRARGTSLTLKMCNQKPAIGDDDCDSDHAGHITAKVGAERLKSTGSLGHTSFVPGVNKMR
LSSTSRLARPLSPLRIEGDVPLFSEADEYSVDNSPRRLIEVASPNPAFNYGIGKAIGGDE
ETNEWKRRNYTDGDRYRAGASISYGLSNGKDHRGPRALINAYGTDRGNGTSNSLEVESLG
INGMGNKVGSRSWQHTEEEEFDWEDMSPTLTDCGRNNDFLHSSVPTLGGVGARPGFGKLG
ASATSLESHNIRSDRSGQVSQRLLHDSSNVAEDTVLYPTRGLPDKINRFPSEPNRVTGAR
YSQEAWNSPHHFSQSSHHFNAKGRVRGFQMPSSANSISSSGGENFSPLFDKVPDADTQLV
RPSVVASGMGSSHHDSLTVGSQSVIASSTGAWPSINVHSSHPPRFPTIPPMQTHIRSHFD
STNASNTVMNQGLSKSLFMPEQQYDGFESKEMSSTKPLSLSDQHVAMNQPNQAQGVPQFI
ASQEARENFLPSVSPSAPRFSLAPPLNRGYNPRGHPTNPIPAVQLPLLAHNIPNISFYPQ
WRGVPPLPPGSTPAPSQMITNLQVAGSITPNQPQGSAYSGLISSLMAQGLISATGQNAVQ
DPVGLEFNADLLKLRYESAINALYGDLPRQCTTCGLRFKCQEQHSSHMDWHVTKNRNSKN
RKQKPSRKWFVSTSMWLSGAEALGTEAVPGFLPTQTVEEKKDDEELAVPADEDQNVCALC
GESFEEFYSDETEEWMYKGAVYLNAPNGSTSSVDGSQSSPIVHAKCRPDSSTVPPEDFGR
DDRGNTEEGSQRKRMRS
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atggaatccgggaaaatccttgtttcccgagaaaaccctagaagcttcttgttcggctcc
acctctgccgccaaggccatgtccaatgaagtctcgctgaaaccaacgcagccgacgccg
atactcgaccggttcagggttcttctgaagcagcgcggtaatgaggctagggtctcgagt
caggatgatggggtgccacctccgagcatggaggagatagtgcagctctatgagttagtg
cttggcgagcttactttcaattcaaaaccgataattaccgatttgactattatagcgggc
gagcagcgggagcatggcgggggcattgcgaatgccatttgtgcccggattatggaggct
ccagttgaccaaaaactgccttccttatatcttttagacagtattgtcaagaacattggc
cgagaatatgttaggtacttctcttcccgtttacctaaggttttctgtgaggcatatagc
caagttgaccctaacctacatccttcaatgcgccacctttttggcacatggtcaactgtg
tttccaccttcagtacttggcatgattgagacccaactgaagttttcttcgtcagtcaat
aatcagtcctcagggttcactccgttgaggtcttctcagtcccctcagccaacccatggc
atacatgttaatcctaagtacctacgacagttggaccattcaactgcgaatactagtatt
caacgtgcaagaggaacttcattgactttgaagatgtgtaatcagaaacctgccattgga
gatgatgattgtgattctgatcatgcgggacacataactgcaaaggttggagccgaaaga
ttgaaatcaactggaagtttgggtcatacgtcttttgtacctggtgttaataagatgcgt
ctgtcatcgacttcgaggcttgcaaggcctttgtcacctttaagaattgaaggtgatgtg
cctttattttcagaagccgatgaatattcggtagataattctcctcgaaggcttattgag
gtagcctctcctaatccagcatttaactatgggattggcaaagcaattgggggagatgag
gagacaaatgaatggaaaagaagaaactatactgatggagaccgttaccgagctggagct
tctatcagctatggccttagcaatggaaaagatcatcgaggacctagagctttgatcaat
gcatatgggactgacaggggaaatggtacctcaaacagtctggaggtggagtccttaggt
attaatggcatgggcaataaggtgggttcaagatcatggcagcatactgaggaagaggaa
tttgattgggaggatatgagccctactttaacagattgtggtaggaataatgatttcttg
cattcatctgttcccactttaggaggtgttggggcaagacctggctttgggaagttgggt
gctagtgctacttcattggaatctcataatatcaggagtgaccggtccggtcaggtgtcg
caacgtttgttgcatgattcttcaaacgttgccgaggataccgttctctaccccactcgt
ggattaccagataagataaatagattcccaagtgagcctaacagggttactggtgctcgc
tattctcaagaagcctggaattcgcctcaccatttttctcagtcatctcaccactttaat
gccaaaggaagggtaagaggtttccagatgccttcttcagcaaacagtatatcttcgtca
ggtggtgaaaatttttctcctctttttgacaaggttccagatgctgacacacaacttgtc
aggccttcagttgttgcatcaggaatgggttcctctcatcatgattctcttactgttggc
agtcagtcagtcatagcgtcatcaacaggggcatggccttctataaatgtacatagttct
cacccacctcgcttccccactattcctcccatgcagacacatattagaagtcattttgat
tctacaaatgctagtaatactgtgatgaatcaaggcttaagcaaatcattgtttatgcct
gagcagcagtatgatggttttgaaagcaaagagatgagctcaacaaagccactgtcattg
agtgatcaacatgttgctatgaaccagccaaaccaggcacaaggtgtgccacaatttatt
gcatcccaggaggcacgtgaaaattttcttccctctgtctcaccatcagctccacgattc
tcactggcaccacctttaaatcgtggatacaacccacgggggcatccaacaaatccaata
cccgcagtgcagctgcctttactagcacacaacattccaaatatctccttttacccgcaa
tggagaggagtccctcccctgcctcctggctccactcctgctccttctcaaatgataacc
aacctgcaagttgctggttcaattacccctaatcaaccacagggtagtgcgtattctggt
cttattagttcactgatggctcaaggtttaatctcagcgacaggacaaaatgctgttcag
gacccagtgggacttgagtttaatgctgaccttctcaaactgcgttacgagtctgctata
aatgctctgtatggtgatcttccaaggcagtgcacaacatgtggccttcgatttaagtgt
caagaacaacacagtagccatatggattggcatgtgactaagaaccgaaattcgaagaac
cgtaagcagaaaccttctcgtaagtggtttgtcagtacaagtatgtggctcagcggtgca
gaggcactgggaactgaagcagttcctgggtttttgccaacccagactgttgaggaaaag
aaggatgatgaggaattggccgtgcccgctgatgaagatcagaatgtatgtgcactgtgc
ggagagtcatttgaggaattttacagtgatgagactgaggaatggatgtataaaggggct
gtctacttgaatgcaccgaatggctcaacatctagtgttgatgggtctcagtcaagtcct
atagttcatgctaagtgtaggccagattctagtacagttccccctgaagattttggacgt
gatgacaggggaaatactgaagagggtagtcaaagaaaacgaatgcgcagctaa
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integrated database retrieval system
