Tripterygium wilfordii (thunder duke vine): 120009382
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Entry
120009382 CDS
T07256
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 42-like
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120009382
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
twl03041
]
120009382
Enzymes [BR:
twl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120009382
Spliceosome [BR:
twl03041
]
Complex A
U2 snRNP components
U2 related factors
120009382
Complex B
120009382
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
120009382
NCBI-ProteinID:
XP_038715887
LinkDB
All DBs
Position
11:14379665..14384886
Genome browser
AA seq
1140 aa
AA seq
DB search
MEDVKHKSRKEDTERKEESRKSHRDHDRGHQRERDKERNGERHKDREKRHRESRRSQREK
SSDSDEVHEKEKEKHRDRDKDRARDKRRDRERDRDLEGKDKERTKEREEKRKRAREKERE
REREREKRERDKEERERERREHDREEREREMEKRRREREKRCEVDSDISDGSRDRDRKRR
WSDDNDYRERERERSISRSQRRKEDTEESPRKRSSEDDSDKKEKTREEEIEDEQQKLDDE
MEKRRRRVQEWQELKRKKEEFEREKHGEVDADEPKAGKTWTLEGESDDEEAPLIGKSEAD
MDIDEDASTGKEVGDTMLVDSEHGTAAPLQNGVDIVVGDEEIDPLDAFMNTMVLPEVEKL
SYTVVPSSVGDNHMEPTKERREQTSNGEKPKRGSNKSLGRIIPGEDSDTDYGDLEKDENN
LEDEDDDEFMKRVKKTKVEKLSLVDHSKMDYKPFRRNFYIEVKELAKMTPEEVAVYRKEL
ELKIHGKDVPKPVKSWHQTGLPSKILETIKKLTFEKPTAIQAQALPVIMSGRDCIGVAKT
GSGKTLAFVLPMLRHIKDQPPVEAGDGPIGLIMAPTRELVQQIHSDIKKFAKVLGIRCVP
VYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSGGKISNLRRVTYFVMDEADRMFDMG
FEPQITRIVQNIRPDRQTVLFSATFPRQVEILARKVLSKPVELQVGGRSVVNKDITQLIE
MRPENERFLRLLELLGQWYEKGKILIFVHTQEKCDALYKDLVDRGYPCLSLHGAKDQTDR
ESTISDFKSNVSSVLIATSVAARGLDVKELELVVNFDVPNHYEDYVHRVGRTGRAGRKGC
AITFISEEDARYAPDLVKALELSEQVVPGDLKALAGSFMAKVNQGLEQAHGTGYGGSGFK
FNEEEDEKRKAAKKALAKEYGFEEDKSDSEDEDEGIRKAGGDISQQATLAQIAAFAAASK
ASTASLQTPITATQLLPNGGLPVSLPGVLNLAIPGTAAVVPGTGLPLNPNDGAARAAALA
AAINLQHNLAKIQADAMPEHYEAELEINDFPQNARWKVTHKETLGPISDWTGAAITTRGQ
YFPPGRIPAQGDRKLYLFIEGPTEQSVKRAKAELKRVLEDITNQALSLPGGVQPGRYSVI
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atggaggatgtgaaacataaatccaggaaggaggatacagagaggaaggaggaatccagg
aagagtcaccgtgaccatgaccgtggtcatcagagggaaagagataaggagaggaatgga
gagaggcacaaggacagagagaagagacacagggaaagcaggcgttctcagagagagaag
agtagtgattctgatgaggtacatgagaaggagaaggagaagcacagagacagggacaag
gatagagctagagacaagaggagagatagagaaagagacagggacttagaaggtaaggat
aaggagaggacgaaagagagagaagaaaagaggaagagggctagggagaaggagagggag
agggagcgagaacgggagaagagggaacgtgacaaggaggagcgggaaagggagaggagg
gaacatgacagagaagaacgagagagagaaatggagaagaggagaagggaaagggagaaa
cgttgtgaggttgacagtgatattagtgatggctctagggatcgtgacaggaagcggcgc
tggagcgatgataatgactacagggagagagagcgtgaacgtagcattagcaggtcacaa
aggcgcaaggaggacactgaggagagcccaagaaaaagaagcagtgaggatgactcagat
aagaaagaaaaaacccgagaagaggaaatagaggatgaacaacagaaactggacgacgaa
atggagaagaggaggaggagagttcaagagtggcaagagttgaagagaaagaaggaggaa
tttgagcgagaaaagcacggggaagtggacgcagatgaacccaaggctggtaagacctgg
actcttgaaggagaatcagacgatgaggaggcgcctcttatagggaaatcagaggcagac
atggacatagatgaggatgccagtactggaaaagaagttggagacacaatgttggttgac
tctgaacacgggacagctgcacctctgcaaaacggagtcgatattgttgttggggatgag
gaaattgatccattggatgctttcatgaatactatggtcttgcctgaggttgaaaagcta
agttatactgtggttccatcatctgtcggtgataatcatatggaaccgacaaaggagagg
agggaacagactagcaatggtgaaaagccaaagagaggttccaataaatcactgggaaga
ataattccgggtgaggattctgatacagattatggggaccttgagaaggatgagaataat
ttagaagatgaagatgatgacgagttcatgaaaagagtaaagaagacaaaagttgagaaa
ttatcccttgttgatcactcaaagatggactataaaccatttcgaagaaatttctatatc
gaggtgaaggagcttgcaaagatgactcctgaagaggttgcggtttacaggaaagaattg
gaattgaagattcatggaaaggatgtaccaaaaccagtgaaatcctggcaccaaacagga
cttccaagtaaaattttggagactataaagaagcttacctttgaaaagccaacggcaatt
caagcacaggcactgccagttattatgagtggtcgggactgcataggtgttgcaaaaact
ggctcagggaaaactctggcatttgtacttccaatgttgagacatataaaggaccagcct
cctgtggaagcaggagatgggcctattgggctcataatggcacctacaagggagcttgtc
cagcaaattcacagtgatataaagaagtttgcgaaggtattgggtattagatgtgtgcct
gtgtatggcggttctggtgttgcccaacagatcagtgaattaaaacgggggactgagatt
gttgtctgtactcctggtaggatgattgacattctgtgtactagtggaggaaagatctca
aatctgcgtagggtcacctattttgttatggatgaagctgatcgaatgtttgatatgggt
tttgaacctcagatcactcgaattgtccaaaatattaggccagatcgtcagactgtactg
ttttctgccacttttcctcgacaggttgaaattttggctcgtaaagtattgagcaaacct
gttgaactacaggttggtgggagaagtgtggtgaataaggacataacccagttaattgag
atgaggccagagaatgagaggttcttaagacttttggaactattgggtcaatggtatgag
aaaggaaagattttgatatttgtgcatacccaggaaaaatgtgatgctttgtataaagat
ttggttgaccgtggttacccttgcctctctcttcatggggctaaggaccaaacagaccgt
gaatccaccatttctgacttcaaaagcaatgtcagcagtgttttgattgcaacaagtgtt
gcagccaggggtttagatgtgaaggagctcgaacttgtggtaaactttgatgttccaaac
cattatgaagattatgttcaccgtgttggtagaactggccgagctggtcgtaaaggttgt
gccattactttcatatctgaagaggatgctagatatgcaccagatcttgtaaaagctttg
gaactttctgagcaagttgttcctggtgacctgaaagcccttgcaggtagttttatggca
aaagtgaatcaggggcttgagcaagctcatggaactggttatggtggaagtggctttaaa
ttcaatgaagaggaggatgagaagaggaaagcggcaaagaaagcactggcaaaagaatat
ggttttgaggaagacaagtcagattcagaagatgaagatgaaggaatcaggaaggcaggt
ggtgatatctcgcagcaagccacccttgctcagattgctgcctttgctgctgcctccaaa
gccagtacagcttcactgcagactcctattacggctacccaattgctacccaatggtgga
ctacctgtttctctgcctggagtattaaaccttgcaattcctggtacagctgctgttgtg
cctgggactggactgcctcttaatcccaatgatggggcagctcgggctgcagcattggca
gctgctatcaacctgcagcataatttggcaaagattcaggctgatgcaatgcctgaacac
tatgaagcagagttggaaatcaatgacttcccccaaaatgctcggtggaaggtcactcac
aaggaaacattaggtcctatttcagactggactggagctgctattaccaccagggggcag
tatttccctccaggccggataccagcacaaggagatcgcaagctctatttgttcattgag
ggtcctactgagcagtctgttaagagagctaaagcagaattaaaacgtgttctagaagac
attacaaaccaggcattgtcacttccaggtggagttcaaccaggcagatactcagttata
tag
DBGET
integrated database retrieval system
