Tripterygium wilfordii (thunder duke vine): 120015074
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Entry
120015074 CDS
T07256
Name
(RefSeq) ubiquitin domain-containing protein DSK2b-like isoform X1
KO
K04523
ubiquilin
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120015074
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
twl04131
]
120015074
03051 Proteasome [BR:
twl03051
]
120015074
Membrane trafficking [BR:
twl04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
120015074
Proteasome [BR:
twl03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
120015074
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
UBA
STI1-HOP_DP
Ubiquitin_2
TBK1_ULD
Dsc3_N
Complex1_LYR_2
Rad60-SLD_2
Ubiquitin_5
XPC-binding
Motif
Other DBs
NCBI-GeneID:
120015074
NCBI-ProteinID:
XP_038723214
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Position
14:complement(131442..136336)
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AA seq
558 aa
AA seq
DB search
MGGGGVSEGEGVSELSGGDGVTINIRSSNGSKFSLQIDLESTVESFKDVLAGKCDIAADQ
QRLIYKGRILKDDQTLKSYGLEADHTVHLVRGFAQATSTNPSPAAVATIAGDSNNALGNA
REAGAIGGGELGESGFGASLFPGLGVGGLSGNGGLFGAGLPELEQVQQQLTRNPNIMREI
MNMPVVQNLMNNPDIMRNMIMNNPQMRELIDRNPELAHVLNDPSTLRQTLEAARNPELMR
EVMRNTDRAMSNIEATPEGFNMLRRMYETVQEPFLNATTMGGNTGSDGSNPFTAFLGTQG
GSQPRDGSTNPSTTGSETTAGSPAPNTNPLPNPWTSAGTGGAQTNPIRSSSSGDARQPAP
AGLGGLGLPEVGGMLGAMPDPSLITQLMQNPAISQMMQSVFSNPQYMNQILGLNPQLRSM
LDSNPQLREIFQNPELLRQMTSPETMQQLLTMQQSVLTLLGRQQSTQEPGLATQTGGGTG
PVTNAGLEMLMNMFGGLGAGSLAVPTRSNAPPEELYATQLAQLQEMGFFDTQENIRALIA
TAGNVHAAVERLLSNSGQ
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgggaggtggcggtgtcagcgagggagagggggtcagtgaattgagcggcggagatggg
gttacaattaacattaggagctcgaacggctcgaaattctctcttcagattgatctcgaa
tcaaccgtcgaatcgttcaaagacgtactggctgggaagtgcgatatcgcggccgatcag
cagcgcctaatttacaagggccggatcttgaaggacgatcaaaccctaaagagctatggt
ttggaggcagatcacaccgtccacttggttcgaggttttgctcaagccacatctaccaat
ccttctcctgccgctgtggcaaccattgctggagattcaaataatgctctaggtaatgca
agagaagcaggtgccattggaggtggggaacttggagagtctggttttggagcttcacta
tttcctggacttggcgtgggtggtttaagtggtaatggtggtttatttggagctggactt
ccagagcttgaacaagtgcagcaacagctgactcggaaccccaacatcatgagagaaata
atgaacatgcctgttgttcaaaaccttatgaataacccagatattatgcgaaatatgata
atgaacaatcctcaaatgcgtgaattaattgatcgtaacccggaactggcacatgttcta
aatgatcccagcacgcttcgtcagacactggaagctgcaagaaaccctgagctgatgcgc
gaggtgatgcgcaatactgacagggcaatgagcaacattgaggctactcccgagggattc
aacatgcttaggcgcatgtatgaaactgttcaagagccatttctgaatgcaacgacaatg
ggtgggaatactggaagtgacggttcaaacccattcactgcttttttgggaacacaaggt
gggagccaacccagagatggatcaacaaacccatcaactacaggctctgaaactactgct
ggttctcctgcaccaaatactaacccccttccaaacccatggacttctgctggcacggga
ggtgctcaaactaaccccataaggtcaagtagtagcggagatgcaaggcaaccagcaccc
gctgggctaggtggacttggtcttccagaggttggaggcatgttgggtgctatgccagat
ccttctttaataactcagttgatgcaaaatccagctatttcacaaatgatgcagagcgtc
ttttccaacccccagtatatgaaccagattcttggtctaaatcctcaactccgcagtatg
cttgattccaatcctcaactgagagaaattttccaaaaccccgaacttcttcgtcagatg
acttctcctgagactatgcagcaattgttaaccatgcagcaatctgtcctcactctgctt
ggtcggcaacagtcaacccaagaaccaggtctggcaactcagaccggaggcggcacagga
ccagttaccaatgcaggtttggagatgttgatgaacatgtttggtggacttggggctggc
agtcttgctgtaccaacaagatcaaatgcgccgcctgaagaattatatgccacccaattg
gcacagcttcaagaaatgggtttctttgacacacaggagaacataagggcattaattgca
actgcagggaatgttcatgctgctgttgagcgactcttgagcaactctggtcagtag
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