Thiomicrorhabdus xiamenensis: HQN79_11290
Help
Entry
HQN79_11290 CDS
T07160
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
txa
Thiomicrorhabdus xiamenensis
Pathway
txa01501
beta-Lactam resistance
txa01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
txa00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HQN79_11290
01503 Cationic antimicrobial peptide (CAMP) resistance
HQN79_11290
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
txa02000
]
HQN79_11290
01504 Antimicrobial resistance genes [BR:
txa01504
]
HQN79_11290
Transporters [BR:
txa02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
HQN79_11290
Antimicrobial resistance genes [BR:
txa01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HQN79_11290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
DUF6286
Motif
Other DBs
NCBI-ProteinID:
QKI90115
UniProt:
A0A7D4P613
LinkDB
All DBs
Position
2447060..2450161
Genome browser
AA seq
1033 aa
AA seq
DB search
MWLSDTSVKRPVLAFVVSMLLLAFGLLSFERMSLREYPNIDPPIVSINTDYLGASASVVE
SRITKVIENRISGVSGIEYIESSSEDGRSRIKVEFSLDRDIDAAANDIRDRVSRILDNLP
QQADPPEVVKVDGDENVIVWFNLASDRMTVSELTDYAERYIVDRFSVLDGVARVRVGGGQ
SYALRIWLDPVKLARNDLTIADIETALRNTNVELPAGSVQGEQVMLTVQIDRQLSSVEDI
ENLVLKQFATGRITLGEVAKVELGAVEKRRLFRGNGIPMVGIGIIKQSTANTLTVAELAR
ERKAQINQSLPEGMSLEDSYDASVFVQNAVHEVYKTLFIALGLVVLVMLVFLKNLRAALI
PAVTLPVSLLATFWILWMLGFSINLLTLLALVLAIGLVVDDAIVVLENIQRHLTLGHKSL
SAAYLGTRQVGFAVVATTLVLISVFMPISFLQGNIGRLFTEFAVTLSVAVLFSSWVALTL
SPALASKILKPVASKTQNAPKKSLLWQKFRPLLKFNLRRPWIAMLVFFGLLALMFQLFKQ
VPQEYVPKEDRGAFFISVKGPEGASYEYMQSYMQEIERRLMPLVESGEAKRLLIRSPRSF
SNAQVFNTGFGIVILNDWSERRSAFLIMQEIRKNLSDLSGVKVAPIMRNSIGGRVSRPVQ
FVISGNSYQQLSEWKVLLNDAIAENNPGLTGIDWDYETNKPQLGVTVDYAKARSLGIEQK
TLNETLQTLLGAKKVTTFMHQGEEIDILLEADHKLLQSPEDLNKVYLRADSGAMIPLTQV
ATLQTYADAAVLNRYNRMRSITLSANLEDDYPLGEALQYLNQLTRDTLPEEAIISYKGQS
KEFAQSNQSLYFVFLFALAIIFLVLAAQFESFKSPLVIMLSVPLAVVGGLLALLIHGQTL
NIYSQIALVLLIGLATKNGILIVEFANQLRDQGKSLYHALMQSVKLRLRPILMTTITTCA
GAIPLIFSSGAGAETRQILGQVLLWGVAFSTLLSLFMVPMFYALIARRAHAPQYTSRLLQ
QQLHKKSKEKQTD
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgtggctttccgatacttcggtcaaacgcccggttctggcgtttgtcgtatcaatgctg
ttgctcgctttcggtctgctttctttcgagcgcatgagtctgcgcgaatacccgaatatc
gatccgccgatcgtttccattaacaccgattacctcggcgcttccgccagcgtcgtcgag
agtcgcattaccaaagtgatcgaaaaccggatttccggcgtttccggcattgaatacatc
gaatcctcttccgaagacggtcgctcgcggatcaaggtcgaattttctttggatcgggat
attgatgccgctgccaacgatatccgcgaccgcgtttccagaattctcgacaatctgcct
caacaggccgatccgccggaagtggttaaggtagacggagacgaaaacgtcattgtctgg
tttaacctggccagcgaccgcatgaccgtcagcgagctgaccgattacgccgagcgctat
attgtcgaccgtttctcggtactggacggcgttgcacgggttcgtgtcggaggcggccag
tcatatgcgctgcgtatctggctcgacccggtcaaactggcacgcaacgacctgaccatt
gccgatatcgaaaccgcattgcgtaacaccaatgtcgaattacccgccgggagtgtgcaa
ggcgagcaggtgatgctgaccgtacaaattgacagacagctgtcctctgtcgaagacatc
gaaaatctggtactgaaacaatttgccacaggccgcatcactttgggcgaggtagccaag
gtcgaactcggtgcagtcgagaaacgccgcctgtttcgcggtaacggcattccgatggtc
ggtatcgggatcatcaaacagtccacggccaacactttgaccgtcgccgaattggcgcgg
gaacgcaaagcgcagatcaatcaaagcctaccggagggcatgtcgctcgaagacagttac
gatgcctcggtgtttgtgcagaatgccgtacacgaagtctataagaccttgtttatcgca
ctcggtctggtggttctggtgatgctggttttcctgaaaaacctgcgtgccgcgctgatt
ccggccgtgaccttaccggtttccctgctggccactttctggattctgtggatgctcggt
ttctcgatcaaccttctgacgctgctggctctggtactcgccatcggtctggtcgtcgat
gatgcgatcgtggtactggaaaatattcagcgccacctgaccctgggacacaaatccctg
tccgccgcctatctcggtacgcgccaggttggtttcgccgtggtcgccacgactctggta
ctgatttcggtgtttatgccgatcagcttcctgcaaggaaatatcggccgcctgtttacc
gagtttgccgtcactctgtcggttgccgtccttttctccagctgggttgcgctgacgctt
tcccctgcgctggcatcgaaaattctcaaaccggtagcttccaaaacgcagaacgcgccg
aaaaaatcccttttatggcagaagttccgccctctgttaaagttcaacctgcgccgtccg
tggatcgccatgcttgtctttttcggccttctggcactgatgttccagcttttcaaacag
gtgccgcaggagtatgtgcccaaagaggatcgcggcgcattctttatcagcgtaaaaggg
ccggaaggtgccagttatgaatatatgcagagttacatgcaggagatcgaacgccgtctg
atgccgctggtcgaatccggcgaagccaaacgtctgttgatccgctcgccgcgatccttc
agcaatgcacaggtatttaacaccggattcggcatagtgattctcaacgactggagcgaa
cgccgctcggctttcctgattatgcaggaaattcgtaaaaacctcagcgatctcagtggc
gtcaaggtcgcgccgattatgcgcaacagcatcggcggacgtgtcagccgcccggttcaa
ttcgtaatcagcggcaacagctaccagcagctcagcgagtggaaagtccttttgaacgac
gccattgccgaaaataaccccggcctgaccggaatcgattgggattacgaaaccaataag
ccgcaactcggcgtcacggtcgattacgcaaaagcccgttctctcggcattgaacagaaa
acgcttaacgaaaccctgcaaacactgctcggtgccaaaaaggtaacgacctttatgcat
cagggcgaagagatcgatattcttctcgaagcggatcataaactgttgcagtctccggaa
gatctcaacaaagtctatctgcgtgccgacagcggcgccatgattccgttgactcaggtc
gccaccttgcagacttacgccgacgcggcggtattgaaccgctataaccgtatgcgctca
atcacgctttcggccaacctagaagatgactatccgctcggcgaagcgctacagtattta
aaccaactcactcgtgacaccctgccggaagaggcgattatcagctataaaggacaaagt
aaggaattcgcgcaaagcaaccagtcgctgtacttcgttttcctgtttgcactggcaatc
attttcctggtgctggccgcacaattcgaaagtttcaaatcgcctttggtcattatgctc
agcgttcctttggcggtagtcggtggcctgctggcgcttctaatccacgggcagaccctg
aatatctacagtcagattgctctggtgctgctgatcgggctggcgaccaaaaacgggatc
ttgattgtcgagtttgccaaccagcttagagaccaggggaaaagcctgtatcacgcattg
atgcagtcggtcaaactgcgtctgagaccgattctgatgaccactattaccacctgcgcc
ggagccattccgctgattttttccagcggtgccggagcggaaacccgacagattctcggt
caggttctgctatggggcgtcgccttttcgacgctgttgagcctgttcatggtgccgatg
ttctacgcgctgatcgcgcgccgcgcgcatgcaccgcaatacaccagccgattgctacag
caacagttgcataaaaagagcaaagaaaaacagactgactag
DBGET
integrated database retrieval system
