Thalassospira xiamenensis: TH3_19860
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Entry
TH3_19860 CDS
T03639
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
txi
Thalassospira xiamenensis
Pathway
txi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
txi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
TH3_19860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
txi03400
]
TH3_19860
DNA repair and recombination proteins [BR:
txi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
TH3_19860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_27
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AJD54074
UniProt:
A0A0B4Y0Z2
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Position
4361582..4364305
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AA seq
907 aa
AA seq
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MNNIADPSDTQTVPLSFDTEGATPMMMQFLEIKEQYQDCLLFYRMGDFYELFFDDAVKAA
EALDIALTKRGKHQGNEIPMAGVPVHSHETYLQRLIRKGFRVAVCEQMEDPAEAKKRGAK
SVVKRGVVRLITPGTLTEDSLLDARRHNYLAAVSEVRGKVGLAWLDMSTGDFYVQPCDMG
GLPAALARLDAGELLISDKLLNRSEMFDIYAEYKNVITPQPASRFDAENAQLRLKKLYEV
AALDAFGGFEIAELSAAGALIDYVDLTQKGQMPRLAPPQRMAAGAAMEIDAATRRSLELT
QTQSGERKGSLLSVIDRTRTGAGARLLAARLSAPLTDAGTINKRLDLVYYFHDRDALRSD
LRAALGECPDIERALSRLSVGRGGPRDLAAMRDGLACAFAIGNLLHKPDGGNDGLTAQPA
ALIDHLTDMGHHGDLVDLLRRSLSENLPLLARDGGFIAGGYHPPLDELRMLSSESKKLIA
NLQARYTEQTAITSLKVKHNNVLGYFIEVPAKQADRMMEIDEFIHRQTMANAVRFTTVEL
SELESKVSKAGDQALALELELFDSLVTGVLEHADAIARCAQALAGLDVSAALAELARDQV
CIRPTIDDSLAFDIRGGRHPVVEAALRENGDSPFVANDCRLEGEQSLWLITGPNMAGKST
FLRQNALIAVLAQIGAFVPAETAHIGVIDRLFSRVGAADDLARGRSTFMVEMVETAAILN
QASDRSLVILDEIGRGTATFDGLSIAWAVVENLHEVNKCRGLFATHYHELTALAAKLAHL
SCHTMLIKEWQGEVVFLHEVGAGSADRSYGIHVAQLAGLPKPVIKRAEQVLKTLEKGEQS
GAVSKLADDLPLFAAAIEQVKQEEKAKTPALSPEQKALLDAVAEIDPDNMTPREALDALY
RLRAIRG
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatattgccgatccttccgatactcagaccgtccccctttcgttcgataccgaa
ggtgcgaccccgatgatgatgcagttccttgaaatcaaggaacagtatcaggactgcctg
ctgttttaccgcatgggcgacttttacgagctgttcttcgacgatgccgtcaaggcggcc
gaggcactcgatatcgcgctgacaaaacgtggcaaacatcagggtaacgaaattcccatg
gccggtgttcccgtccatagccacgaaacatatcttcagcgtctgatccgcaagggtttc
cgtgtcgctgtctgcgaacagatggaagacccggccgaggccaagaaacgcggcgccaaa
tccgtcgtcaaacgcggcgttgtccgactgatcacgcccggcaccctgaccgaagacagc
cttctggatgcccggcgccataactatctggctgcggtgtccgaagttcgcggcaaggtc
ggtctagcctggcttgatatgtcgaccggcgatttttatgttcagccctgtgatatgggc
gggcttcctgccgcccttgcccgtcttgacgctggtgagcttctgatatcggacaaactt
ctgaatcgttcggaaatgttcgatatctacgccgaatacaaaaacgtcatcacaccgcaa
cccgcatcacgctttgatgccgaaaatgcccagctgcgccttaaaaaactatatgaagtt
gcggccctggacgcttttggcggattcgaaattgccgaactttcggcggccggggcgcta
atcgattatgtcgatctgacccagaagggtcagatgccgcgccttgccccaccgcaacgc
atggctgcgggtgctgcaatggaaatcgatgccgccacccgccggtcactggaattgacc
cagacccaatcaggtgagcgcaagggatcacttttatcggtcatcgaccgtacccgcact
ggcgcaggtgcacgcttgctagccgcccgtctgtccgcaccgctgaccgatgcgggcacg
atcaataaacgccttgatctggtctactatttccatgatcgcgatgccctacggtccgat
ctgcgcgctgcccttggcgaatgtccggatatcgaacgtgcattgtcacgtctgtccgtc
ggtcgtggcggcccacgcgatctggctgccatgcgcgatggtctggcctgtgcctttgcg
attggcaaccttttgcacaaacccgatggcggcaatgacggcctgaccgcgcaacccgcc
gcccttatcgatcatttgaccgatatgggccatcacggcgatctggttgatcttctgcgc
cggtcgctcagcgaaaatctgccgttgctggcacgtgatggcggctttatcgcgggtggt
tatcacccgccgcttgatgaattgcgcatgctttcaagcgaaagcaaaaagctgatcgcc
aatctgcaggcccgatataccgaacaaacggccatcaccagccttaaggtcaaacacaac
aacgtccttggctacttcatcgaagtaccggccaaacaggctgaccggatgatggaaatc
gatgaatttattcatcgccagaccatggccaatgcggttcgtttcaccacggtcgagctg
tccgagctcgaaagcaaggtttccaaggccggggatcaggcgcttgcacttgaactcgaa
ctgtttgactcactggtcacgggcgtccttgaacatgccgacgccatcgcgcgctgtgca
caggcgcttgccgggcttgatgtgtcggccgcgttggccgaactggcgcgtgatcaggta
tgtatccgcccgaccattgatgacagccttgcctttgatatccgtggcggtcgccatcca
gtggtggaagccgccctgcgcgaaaatggcgacagcccctttgtcgccaatgactgccgc
cttgaaggcgaacaaagcctttggctgattactggtccgaacatggccggtaaatcgacc
ttcctgcgccagaatgccctgattgcggttctggcccagatcggtgcctttgtcccggcg
gaaacggcgcatatcggtgtgattgaccggctgttttcgcgtgtcggggcagcggatgat
ctggcgcgtggccggtcgacattcatggtcgaaatggtcgaaaccgccgccatccttaat
caggcatccgatcgttcgctggttatccttgatgaaatcgggcgcggcacggcaacattt
gatggtctttcaattgcttgggcggttgttgaaaacctgcacgaagtcaataaatgccgt
ggcctcttcgcaacccactatcatgaactcaccgcccttgccgccaagcttgcccatctg
tcctgccacaccatgctgatcaaggaatggcagggcgaagtcgtcttcctgcacgaagtc
ggtgcaggaagtgcggatcggtcttatggcattcatgttgcccagctcgcaggcctgccc
aaaccagtgatcaaacgcgccgaacaggtactgaaaaccctggagaagggcgaacagagc
ggtgcggtttccaaactggccgatgacctgccgctttttgctgccgcaatcgagcaggtc
aaacaggaagaaaaagccaaaacccctgcattgtcgccagaacaaaaggcccttctggat
gctgtggctgaaatcgatcccgataacatgaccccgcgcgaggcacttgatgcgctgtat
cgcttgcgcgccatacgcggttga
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