Ursus arctos (brown bear): 113253264
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Entry
113253264 CDS
T05909
Symbol
THOC1
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
uah
Ursus arctos (brown bear)
Pathway
uah03013
Nucleocytoplasmic transport
uah03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
uah00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113253264 (THOC1)
09122 Translation
03013 Nucleocytoplasmic transport
113253264 (THOC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
uah03019
]
113253264 (THOC1)
03041 Spliceosome [BR:
uah03041
]
113253264 (THOC1)
Messenger RNA biogenesis [BR:
uah03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
113253264 (THOC1)
Spliceosome [BR:
uah03041
]
Complex C
Other components
EJC/TREX
113253264 (THOC1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
113253264 (THOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Death
HsdM_N
Motif
Other DBs
NCBI-GeneID:
113253264
NCBI-ProteinID:
XP_026351844
EnsemblRapid:
ENSUARG00005023107
LinkDB
All DBs
Position
Unknown
AA seq
657 aa
AA seq
DB search
MSPTPPLFSLPEARTRFTKSTREALNNKNIKPLLSTFSQLPGSENEKKCTLDQAFRGVLE
EEIINHSSCENVLAIISLAIGGVTEGICTASTPFVLLGDVLDCLPLDQCDTIFTFVEKNV
ATWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQ
FNLENVTVFNTNEQESTLGQKHTEDREEGMDVEEGEMGDDEAPTTCSIPIDYNLYRKFWS
LQDYFRNPVQCYEKISWKTFLKYSEEVLAVFKSYKLDDTQASRKKMEELKTGGEHVYFAK
FLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKSV
YQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKERTSDTKPTRVARKRTAPE
DFLGKGPNKKILMGNEELTRLWNLCPDNMEACKSESREYMPTLEEFFEEAIEQADPENMV
ENEYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKELPPPSEEI
KTGEDEDEEDNDALLKENESPDVRRDKPVTGEQIEVFASKLGEQWKILAPYLEMKDSEIR
QIECDSEDMKMRAKQLLVAWQDQEGVHATPENLMNALNKSGLSDLAESLTNDNETNS
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgtctccgacgccgccgctcttcagtttgcctgaagcgcggacgcggtttacgaagtct
accagagaggccctgaacaacaaaaatatcaagccattattgagtaccttcagccaatta
cctggcagtgaaaatgaaaaaaaatgtacccttgaccaagctttcagaggtgttctagaa
gaagaaattataaatcactcatcatgtgaaaacgttttagctattatttctcttgctatt
gggggagtaactgaaggtatttgtaccgcatctacaccttttgtgttgttgggagatgtt
ttggattgtcttcctttggatcaatgtgacacaatattcacttttgtggaaaaaaatgtt
gctacttggaaatcaaacacgttctattctgctgggaaaaattatttactacgtatgtgc
aatgatctccttagaagattatcaaaatcccagaatacagtcttctgtggacgaattcaa
ctctttttggccaggcttttccctttatctgagaaatcaggtcttaacttgcagagtcaa
tttaatttggaaaatgtcactgttttcaataccaatgagcaggaaagcaccctgggtcag
aagcacactgaggatagagaagaaggaatggatgtagaagaaggtgaaatgggagatgat
gaagctccaacaacttgctccattccaattgattacaacctgtatcgaaaattctggtca
cttcaggattacttcaggaaccctgtacaatgctatgagaagatttcatggaaaactttt
cttaagtattctgaagaagttctagctgtttttaaaagttacaaattagatgatactcag
gcctccaggaaaaagatggaagaattaaaaacaggaggagaacatgtatattttgcaaaa
tttttaacaagtgaaaagttgatggatttacaactgagtgacagtaactttcgtcgacac
atcctgttgcagtatctcattttattccagtatctcaaggggcaggtcaaattcaaaagt
tcaaactatgttttaactgatgagcaatcactctggattgaagatactacaaaatcagtt
tatcaactactatctgaaaacccccccgatggagaaagattttcaaagatggtagagcat
atattaaacactgaagaaaactggaactcatggaaaaatgaaggctgcccaagttttgtg
aaagaaagaacatcagacaccaagccgacaagagtagctcgcaagagaacagcaccggag
gacttcctagggaaaggacccaacaaaaagattctgatgggaaatgaggagttaacaagg
ctttggaatctctgtcctgataatatggaagcttgcaaatcagagtcaagggaatacatg
ccaactttggaggaattctttgaagaagccattgaacaggcagaccctgaaaacatggtt
gaaaatgaatacaaggctgtgaacaattcaaattacggttggcgagccctgagactatta
gcacggagaagccctcacttcttccagccaaccaaccagcaatttaaaagtttaccagag
tatctcgaaaacatggtaataaagctagcaaaggaactaccacctccttctgaagaaata
aaaacaggtgaggatgaagatgaggaagataatgatgctttactgaaggaaaatgaaagc
cctgatgttcgacgagacaaacctgtaacaggggaacaaatagaggtgtttgccagtaaa
ctgggcgagcaatggaagatcctggccccctacttggaaatgaaagactcggaaattaga
caaattgagtgtgatagcgaagacatgaagatgagagctaagcagctactggtcgcctgg
caagatcaagagggagtacatgcgacacctgagaatctgatgaacgcactgaataagtct
ggattaagtgaccttgcagaaagtctaactaatgacaatgagacaaatagttag
DBGET
integrated database retrieval system
