Ursus americanus (American black bear): 123785622
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Entry
123785622 CDS
T07931
Symbol
UPF3B
Name
(RefSeq) regulator of nonsense transcripts 3B isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
uar
Ursus americanus (American black bear)
Pathway
uar03013
Nucleocytoplasmic transport
uar03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123785622 (UPF3B)
03015 mRNA surveillance pathway
123785622 (UPF3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
uar03019
]
123785622 (UPF3B)
Messenger RNA biogenesis [BR:
uar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
123785622 (UPF3B)
mRNA cycle factors
P-body specific factors
123785622 (UPF3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
123785622
NCBI-ProteinID:
XP_045643405
LinkDB
All DBs
Position
Unknown
AA seq
485 aa
AA seq
DB search
MKEEKEHRPKEKRVTLLTPPGAAGSGAGASGDGTKGEDKQDRNKEKKEALSKVVIRRLPP
TLTKEQLQEHLQPMPEHDYFEFFSNDTSLYPHMYARAYINFKNQEDIILFRDRFDGYVFL
DNKGQEYPAIVEFAPFQKAAKKKTKKRDTKVGTIDDDPEYRKFLESYAADNEKMTSTPET
LLEEIEAKNRELIAKKTTPLLSFLKNKQRMREEKREERRRREIERKRQREEERRKWKEEE
KRKRKDIEKLKKIDRVPERDKLKDEPKIKVHRFLLQAVNQKNLLKKPEKGDEKELDKREK
AKKLDKENLNDERASGQSCTLPKRSDGEPKDEKPKRPEEDSGRDYRERERDYERDQERIL
RERERERLKRQEEERRRQKERYEKEKAFKRKEEELKKEKEAVRDKGKKTESTESVGSSEK
TEKKEEVVKRDRIRNKDRPAMQLYQPGARSRNRLCPPDDSTKSGDSAIEKKQESGISHRK
EGGEE
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaggagaaggagcataggcctaaagagaagcgagtaaccctgttgactcccccg
ggggccgcaggcagcggcgctggggcttcgggggacggcaccaaaggggaagataagcag
gatcgaaataaggagaagaaagaggcgctgagcaaggtggtaattcggagattacctccc
actttgaccaaggagcagcttcaggaacatcttcagcctatgccagagcatgattatttt
gagtttttttctaatgatactagtctgtatcctcatatgtatgccagagcatacatcaac
tttaaaaaccaagaggacattattttgttcagggatcgctttgatggttatgtattcctt
gacaataaaggtcaggaatatcctgctatagtagaatttgcaccttttcaaaaagctgca
aaaaagaagactaagaaaagagataccaaagttgggactatcgatgatgatccagaatat
agaaaatttttggaaagttatgctgcagataatgagaaaatgacatctactccagagaca
ctgctagaggaaatagaagccaaaaatagagaattaatagctaaaaagacaaccccactt
ttgagcttcctgaaaaacaagcagagaatgagagaagaaaaaagagaagaaagaaggagg
cgagaaatagaaaggaaaagacaaagagaagaagagaggagaaagtggaaagaagaagaa
aaacgaaaaaggaaagatatagaaaagctaaagaagatagacagagttccagaaagggac
aaattaaaggatgaaccaaagattaaggtacacaggtttctgttacaagctgtgaatcag
aaaaatctactcaagaagccagaaaaaggagatgaaaaagaattagataaaagagaaaaa
gccaagaaactggacaaagagaatctgaatgatgaaagagccagtgggcagagttgtaca
ctgcccaagcgctctgatggcgaacctaaagatgaaaagcctaagaggcccgaagaggac
agtggcagagactacagggagcgggagcgggactacgagcgagaccaagagcgcatcctg
cgggagagggagagggagaggctgaagcggcaggaagaggagcgccgcaggcagaaggag
cgctacgagaaggagaaggcttttaaaagaaaggaagaagaattgaaaaaagagaaagaa
gcagttcgggataaaggaaagaagactgaaagtacagaatcagtaggcagctcagaaaaa
actgaaaagaaagaggaagtggttaagagagatcgcataagaaacaaggatcgcccagca
atgcagctttaccaaccaggagctcgaagccgaaatcgactctgtccacctgatgacagc
accaagtctggagattcggcaatagaaaaaaagcaggaaagtggtattagccatagaaaa
gaaggaggagaggagtga
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