Ursus americanus (American black bear): 123790338
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Entry
123790338 CDS
T07931
Symbol
DDX46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46 isoform X1
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
uar
Ursus americanus (American black bear)
Pathway
uar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123790338 (DDX46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
uar03041
]
123790338 (DDX46)
Enzymes [BR:
uar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123790338 (DDX46)
Spliceosome [BR:
uar03041
]
Complex A
U2 snRNP components
U2 related factors
123790338 (DDX46)
Complex B
123790338 (DDX46)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
FAM176
Motif
Other DBs
NCBI-GeneID:
123790338
NCBI-ProteinID:
XP_045650620
LinkDB
All DBs
Position
Unknown
AA seq
1032 aa
AA seq
DB search
MGRESRHYRKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRS
RSRDRKRLRRSRSRERDRSRERRRSRSRDRRRSRSRSRGRRSRSSSPGNKSKKAENRSRS
KEKTDSGESSKEKKKDKDDKEDEKEKDAGNFDQNKLEEEMRKRKERVEKWREEQRKKAME
NIGELKKEIEEMKQGKKWSLEDDDDDEDDPAEAEKEGNEMEGEELDPLDAYMEEVKEEVK
KFNMRSVKGGGGNEKKSGPTVTKVVTVVTTKKAVVDSDKKKGELMENDQDAMEYSSEEEE
VDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGI
TVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGS
GKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVY
GGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFE
PQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVI
EEEKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDS
IINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAY
TFITEDQARYAGDIIKALELSGTAVPPDLEKLWSDFKDQQKAEGKIIKKSSGFSGKGFKF
DETEQALANERKKLQKAALGLQDSDDEDAAVDIDEQIESMFNSKKRVKDMAAPGTSSVPA
PTAGNAEKLEIAKRLALRINAQKNLGIESQVDVMQQATNAILRGGTILAPTVSAKTIAEQ
LAEKINAKLNYVPLEKQEEERQDGGQNESFKRYEEELEINDFPQTARWKVTSKEALQRIS
EYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRLIKEELIRLQNS
YQPTNKGRYKVL
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgggagtcacgccactatcggaagcgttcagcatcaagggggcgctctggaagt
cgttctagaagtcgctcaccctcagacaaaagaagtaaacgtggagatgacagacggtct
agaagcagagatagagacagaaggagagagaggtctcgtagcagggataaaagaagatct
cggtcaagagaccggaagcgccttaggcgttccagaagtagagagagagacagaagtcga
gagcgaagaagatctcgaagtcgagacaggagacgttctaggagtagaagccgaggccgg
cgatccagatcctccagtcctggcaataaaagcaagaaagctgagaataggtctagatcc
aaagagaaaacagatagtggggaaagttctaaagagaagaaaaaagacaaagatgacaag
gaagatgaaaaagaaaaagatgctggcaactttgatcagaataagctggaagaagaaatg
agaaaacgaaaagaaagagtagaaaaatggcgagaagagcaacgtaaaaaggccatggaa
aacataggggaactgaaaaaggaaattgaagagatgaaacaagggaaaaaatggagttta
gaagatgatgatgatgatgaagatgatcctgcagaggctgaaaaggaaggaaatgaaatg
gagggtgaggagttagatccattagatgcttacatggaagaagtcaaagaggaagtaaag
aagtttaatatgagaagtgtgaaaggtggtgggggaaatgaaaagaagtctgggccaacg
gtcacaaaagttgtcactgtcgtgacaaccaaaaaagcagtggtagattctgataagaag
aaaggtgagctgatggagaatgaccaggatgccatggagtattcttcagaggaggaagaa
gttgatcttcagacagctcttacaggctatcagacaaaacagagaaagcttctagaacca
gtggaccatggaaaaattgaatatgaaccgttcagaaaaaacttttatgttgaagttcca
gaattagcaaaaatgtctcaagaggaggtaaatgtatttcggttggaaatggagggcatt
actgtcaagggaaaaggttgccccaaaccaattaaatcatgggtccagtgtggcatttcc
atgaagatcttaaattctctcaaaaagcatggctatgaaaagcccacaccaatccaaacc
caggcgattcctgctataatgtctggacgagatttgattggtattgcaaagacaggaagt
ggaaagaccattgcttttctgttacccatgtttagacacatcatggatcagaggtcatta
gaagaaggagaggggccaatagctgtcatcatgactccaactcgagaactggctttacaa
attactaaagaatgtaagaagttttcgaagaccctgggacttagagtggtgtgtgtttat
ggaggaacaggaatcagtgagcagattgctgaactgaaaagaggtgctgaaattattgtt
tgcacacctggtcgaatgattgacatgttagcagctaacagtggtcgggtcacaaatctt
cgaagagtgacatatgttgttttagatgaagcagacagaatgtttgacatgggttttgaa
ccacaggtcatgcgcattgtggataatgtccgtcctgatcgacagacagttatgttttca
gctacttttcccagagctatggaggctttggctcgcagaatcctgagtaaacccattgaa
gtgcaggttggaggcaggagtgtggtttgctcagatgtggaacaacaagtgattgtgatt
gaagaagaaaagaaattcttgaagttacttgagcttcttggccattaccaagagtcggga
tctgtcattatttttgtggataagcaggaacatgctgatggtcttctgaaagatttgatg
agagcgtcgtatccttgcatgtctcttcatggaggcattgatcaatatgacagagatagc
atcataaatgactttaagaatgggacctgcaaacttcttgtagctacttctgttgctgcc
cgaggtctagatgtgaagcatctgattcttgtagtaaattacagctgccccaaccattat
gaggattatgtgcacagagcaggacggactggaagagcaggcaataaaggttatgcgtat
acttttatcacagaagatcaagctcgctatgctggtgacataattaaagctcttgaattg
tcaggaactgcagtgcctcctgacctggagaaactttggagtgatttcaaagatcagcag
aaagctgaagggaaaataattaaaaagagtagtgggttctctggtaagggattcaagttt
gatgaaacagaacaagctttggctaacgagaggaagaagttgcaaaaagcagctcttggt
ctgcaggattcagatgatgaggatgctgcagtcgacattgatgaacaaattgaaagtatg
tttaattcaaagaagagagttaaggatatggctgcgcctggaacgtctagtgttcctgct
ccaactgcaggaaatgctgagaaattagaaattgctaagagattggctcttagaatcaat
gctcagaagaatttgggcattgagtctcaggtagatgtgatgcaacaggccaccaatgcg
attctcagaggtggcaccatcctggctcccactgtgtctgccaaaaccattgcagagcaa
cttgctgaaaagatcaatgccaagctcaattatgtgcctttggagaaacaagaagaggag
agacaggatggtggacaaaatgaatcttttaagagatatgaggaagaattagagatcaat
gacttcccacagactgctaggtggaaagttacctctaaggaagctctgcagagaatcagt
gagtattctgaagccgcaattacaatcagaggaacatatttccctcctggcaaagaacct
aaggaaggagagcggaaaatttacttggcaattgaaagtgccaatgaactggctgtgcag
aaagcaaaggcagaaatcaccaggcttataaaagaagaactgattcggctgcaaaattca
taccaaccaacaaataaaggaagatacaaagtcttataa
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