Ursus americanus (American black bear): 123790375
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Entry
123790375 CDS
T07931
Symbol
HELZ2
Name
(RefSeq) helicase with zinc finger domain 2
KO
K25165
3'-5' exoribonuclease HELZ2 [EC:
3.1.13.1
5.6.2.6
]
Organism
uar
Ursus americanus (American black bear)
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
uar03019
]
123790375 (HELZ2)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
uar04990
]
123790375 (HELZ2)
Enzymes [BR:
uar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
123790375 (HELZ2)
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
123790375 (HELZ2)
Messenger RNA biogenesis [BR:
uar03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
123790375 (HELZ2)
Domain-containing proteins not elsewhere classified [BR:
uar04990
]
Zinc finger domain-containing proteins
Other zinc finger domain-containing proteins
123790375 (HELZ2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
RNB
AAA_30
AAA_19
ResIII
PhoH
AAA_22
nSTAND3
DEAD
UvrD_C_2
UvrD-helicase
Viral_helicase1
SLFN-g3_helicase
zf-C2H2_jaz
AAA_24
Helicase_RecD
Bac_DnaA
Motif
Other DBs
NCBI-GeneID:
123790375
NCBI-ProteinID:
XP_045650724
LinkDB
All DBs
Position
Unknown
AA seq
2929 aa
AA seq
DB search
MATKELSLARLCAQVDLYLGCPRCTQRLNESTYVLRRVEHSCPEEILLARFKRAPKSRVW
RKVDRRPSFPRPARYEVCWYYTPGLGCQRHRNQCTFARSPEEALVWTFEREHNVRRLWLK
TELQGGRAQGQLRSPADAIRAEYGGQFQLLCSHCFRCCPPCLCPVDPQGRCPRHGACPSL
LTHVSAEGRRKQQVVEVRPQPQYGQPLAYCTYVGRGRPCRHGASRCQYAHSAVEMAVWEA
EQLDGLQRRDLLSPTAPRGDERTVPHGQPPAVRLYCHACLVTCHSQEAFENHCSSLEHAQ
MVALDQVEAWEHRSPPTGLSTFELCPKPSLCEYGDVCTKAHSQQELQEWIQRTQTLKLRE
QAAWQEGLVSYQARLLAEYQRSRSEVLVLAENVEGVSITCPQPLVHQAHERKTQHSWVFD
IQSEEPLLHVALLKQELGADFSLVAPCLPLGQLYAKGERFRARASPAKFQVEVRVQSTSF
GSFEQWVVFDFGRRPVLLRKLGLQLGQVRCPGLRGSRAHGHLEELERWHTGNRHVVPGVE
RTAEQVALLAKYKVPALALDFSHAGPAPGPVSRDNYRQRMHHFLYEEEATQQRLVAKLNF
RGPVSLRTMLQTPALGMLFPPSGALYAEVPTPSSLMPDTDEGFLLGRAVSTALVAPVPAP
DHTVFEVRLETRASSEQALWLLLPARCCSALGLQPETSPVLEVQFQIDPLTFRYWHQAVD
ALPEERLVVPDLPTCDVPRPLPTPPTMQGNHKQKLAVAFIAGRSPGGTRPIAPLLIYGPF
GTGKTYTLAMASLEVIRQPHTRVLICTHTNSAADIYIEEHFHRYVSSGHPEATPLRVMYT
DRPPSQTDAATLQYCCLTGDRRAFRPPTRAELEQHRIVVTTTSQARELRVPAGFFSHILI
DEAAQMLECEALTPLRYASPSTRVVLAGDHMQVTPKLFSVARAQAAAHTLLYRLFQHYQQ
EEHEVARHSRIVFHENYRSTEAILSFVSRHFYVAKGSPIHASGKVPRHPKHYPLMFCHVA
GSPERDMSRTSWLNAAEIVQVTEKVQEIYQSWPPCWGGREQRSICAVSHGAQVSALRQEL
RRRDLGQVSVGSFEILPGREFRVVVLSTVHDHDSLLSSGAPALGFFTDARVLNTVMTRAQ
SQVVAVGNAVALCSFGACSKLWKSFIRECVKHCSVSPKTLSLEHIEQSVVHRQRWALRAE
RSVAAGAQDTVPEEGAAGAPATEHAATEKVRPGAKAEGSTSPSETSAAGDEATRRTEAGD
AALGSVAGGCPAVGDTVHTEAEDTTSAGNSSVGDLAPGKAAAGPTAMENGDAEDPEDAES
DFWPSDTELNTDDSILQELLDEARNVMVTVREDGLLDTVARPASPHRARQYTNLPRATLR
RRLCSEPELYRRCTFVQETFDRATAMPLDDVDSGPIQIRGRLRCGMAFSGDEVLVKVLGA
DGGSAGRLQGQVVGVLKRGRRELVFVCRMDEWDPRIMTPVDGSVTKIFVAELKDPLQVPV
HRVQQGRVQRVGYERLTAEDRGSRLFWVRIVLWRQRFYYPLGIVLEVLPEATTWEQGLRI
LDLEHGLREPSVEPACVSKALQKYRAELGRAPDCREDCRGFLTFTVDPQGARYLDDALSV
RDLGSRYEVAVHIADVASSVPRDGPLDLEARRRGVTFYAPDREPVPMLPAGLCQDAFSLL
PGQDRLAISLFLTIEKGSDQLKSLRFAPSVICSDRQLSYEEAEHVIKRHPGAGRELPARL
DSVDACVVAACHLSRVLRRGRLRTDSHYEQPSEDCVLGFRAAHVMVKEYMIQFNSLVAEL
LVSSEPTRTVTPLRWQPTPSERQLGALCEKHRELVPLSLHLRHHLGGRGAPVGQVCLLAS
LWRHLQCAASAGDGDWLADLITTDDMHPTLAPVGLDFRKALGRSVFGRSRQGERQAAGHY
SLQVDWYTWATSPIRRYLDVVLQRQILLALGHGGSPYSARDIDGLCQEFSCQYGRAQSYQ
RQARSLHLGAQLRVRPRSKLGFVVGVEAGARCFRLLFPADPETLPDPCPVHYRSLQLAEH
PSDLERRPGLRLAWRRRIYSVQADRPCSPRPGTLLDSHTRRVDTTLWQQLLQLVQEERWP
EVAALVRERGAAEPRRQALGHVRQSRCGRFVEVARELGSGDTLQVQLSASLQRGFLVPSL
QLCTVAPGLTLCLEHVERPGDCFLDQTPQPVRDHCLDVGEYSRVWGPFCSLESATSAVSE
SDPVMLQHVSVSWDAKRVAQGQLQGSFCLEPSFLSERCTDLTFGPWYLCIRLEGLPAVPA
AGELRPPAVPGQPHLAAPPCGPLLSIDPDTYTWVAHGLTTHWDTEEGRADRQEIPRQVHF
FIQHMAVEKVPEEVLRPGTQFTIEVLPKQLPDIRKEEAVRRLESASPLVVSIALGQPIPP
SCHLPPQQTRHRGTYSRLLEKQTFDLPGGGHTLNSSQNRAVRAALQKRFTVIQGPPGTGK
TVVGFHIVFWFHKSNEEQAMAWGAPSEKPVGGPYILYCGPSNKSVDVLAGLLLSRRAELK
PLRVYSEQAEATEFPVPGVGSSGLPKKTPREGRPNQTLRSITLHHRIRQSSNPYAPDIRE
FDARLQKGEVFSKDDLTRYKLVLGKARKFELEQHRVVLCTCSCAASRSLKKLAVRQILID
EAGMATEPETLIPLVTFSQAEKVVLLGDHKQLRPVVKNEQLQNLGLDRSLFERYHMDAHL
LDTQYRMHEGICAFPSMEFYKKRLKTWCGLRRPPSILGHTGKESCSVIFGHVQGHEQSLL
VSTDEGNENSKANPEEVAQVVRIAKQLTLGRTVDPKDVAILTPYNAQAAEISKSLGREGV
TGVTVCSVTKSQGSEWRYVLVSTVRTCPESDLDQRPTKSWLKKFLGFVVDPNQVNVAITR
AKEGLCLIGDHRLLRCCPLWRRFLDFCEDQRTLVPASQVRVRRRPAVSP
NT seq
8790 nt
NT seq
+upstream
nt +downstream
nt
atggccaccaaggagctctctctggccaggctgtgtgcccaggtggacctgtacctgggc
tgcccccgctgtactcagcgcctcaatgagagcacctacgtcctgcggagggtggagcac
agctgtcccgaagagatcctgctggcccgcttcaagcgagcccccaagagccgggtctgg
cgcaaggtggaccggcggcccagcttcccacggcctgcccgctatgaagtctgctggtac
tacaccccagggcttggctgccagcgccaccgcaaccagtgtaccttcgcccgaagcccg
gaggaggccctggtctggaccttcgagcgtgagcacaatgtccggcgtctgtggctcaag
actgagctgcagggcggccgggcccagggccagctgcgcagcccagccgatgccatccgt
gccgagtatggcggccagttccagctgctctgctcccactgcttccggtgctgtcctcca
tgtctctgcccggtggacccccaggggcgctgccccaggcatggcgcctgcccttcgctc
ctgacccacgtgagcgccgagggccgccgcaagcagcaggttgtggaggtgcggccccag
ccccagtacggccagcccctggcctactgcacgtacgtggggcgtgggcggccgtgccgg
catggggcatcccgctgccagtacgcgcacagcgcggtggagatggccgtatgggaggct
gagcagctggatgggctccagcggcgggacctgctctctcccactgcccccagaggggat
gagcgcaccgtcccccatggccagccccccgcagtcaggctgtactgccacgcctgtctg
gtcacctgccactcccaggaggcctttgagaaccactgctcatctctggagcatgcacag
atggtggccttggaccaggtggaggcctgggagcaccgcagcccacccacggggctctcc
acgtttgagctctgcccaaaacccagcctctgtgagtacggggacgtctgcaccaaggca
cattcccagcaggagctgcaggagtggatccagcggacacagaccctaaagctgcgggag
caggccgcctggcaggaagggctggtgtcttaccaggcgcggctgctggctgagtaccag
cgcagcaggagtgaggtcctggtgctggctgagaacgtcgagggcgtgtccatcacctgc
ccccagcccttggtgcatcaggcccatgagaggaaaactcagcacagctgggtattcgac
atccagtctgaggagcccctgcttcacgtggccctgctcaagcaggagctgggagcagac
ttctcgctggtggccccctgccttccgctgggccagctctatgcgaagggggagcgcttc
cgtgcgcgtgcctccccagccaagttccaggtggaggtgcgcgtgcagagcacctccttc
ggctccttcgagcaatgggtggtcttcgacttcggccgcaggccagtgctgctgcggaag
ctggggctgcaactgggccaggtgcgctgcccggggctccggggctcgcgggcgcacggc
cacctcgaggagctggagcgctggcacacgggcaaccgccacgtggtgcctggtgtggag
cgcacggccgagcaggtggccctgctggcgaagtacaaggtgcccgccctggcgctggac
ttcagtcacgcgggccccgccccgggtcccgtctcccgcgacaactaccggcagcggatg
caccactttctctatgaggaggaggctactcagcagcggctggtggccaagctgaacttc
cggggcccagtgtccctgaggacgatgctgcagacgccggccctgggcatgctcttcccg
ccgtcaggagccctctatgccgaggtccccaccccctcgtctctgatgccagacacagat
gagggctttctgctgggccgggcggtcagcacagccctcgtggcccctgtccccgcacct
gaccacacggtgtttgaggtgcggctagaaacacgggccagctcggagcaggcactgtgg
ctgctgctgcccgcccgctgctgctcggccctggggctgcagcccgaaaccagccccgtc
ctggaagtccagttccagatcgacccgctgaccttccgctactggcaccaggcagtggat
gcgctgcccgaggagcgcctggtggtgcctgacctgccgacctgcgacgtgccccgtcct
ctgcccaccccacccacaatgcagggcaaccacaagcagaagttggctgtggccttcatt
gcgggcagaagccccgggggcacgcggcccattgcccccctgctcatctatggccctttt
ggcacaggcaagacctacacgctggctatggcctcactggaggtcatccggcagccccac
accagggtcctcatctgcacacacaccaacagtgcggctgacatctacatcgaggagcac
ttccaccgctacgtcagcagcggccaccccgaggccactccgctgcgggtgatgtacacg
gaccgcccgcccagccagacggacgcggccacgctgcagtactgctgcctgaccggggac
cgccgggccttccggcccccgacgcgggcggagctggagcagcaccgcatcgtggtcacc
accacctcccaggcccgcgagctcagggtgccggccggcttcttctcgcacatcctcatc
gacgaggctgcgcagatgctggagtgcgaggcgctcaccccgctgcgctacgcctcgccc
agcacccgcgtggtgttggcgggggaccacatgcaggtcacgcccaagctcttcagcgtg
gcccgcgcgcaggccgcggcgcacaccctgctgtaccgcctcttccagcactaccagcag
gaggagcacgaggtggcccggcacagccggatcgtcttccacgagaactaccgctccacc
gaggccatcctcagcttcgtctcacggcacttctacgtggccaagggcagccccatccac
gccagcggcaaggttcctcgccaccccaagcactacccgctcatgttctgccacgtggcg
ggcagccccgagcgcgacatgtctcgtacgtcctggctgaacgcggcggagatcgtccag
gtcaccgagaaggtgcaggagatctaccagagctggcccccctgctggggcggccgtgag
cagaggagcatttgtgccgtgtcccacggtgcccaggtgagtgcgctgaggcaggagctg
aggaggagggacctgggccaggtgtctgtgggcagcttcgagatcctgccagggcgggag
ttccgggtggtggtgctgagtaccgtgcacgaccacgacagcctgctgagctcgggggca
cccgccctggggttcttcaccgacgcccgtgtgctcaacaccgtcatgacccgcgcccag
tcccaggtggtggctgtgggcaatgccgtggccctctgctccttcggggcctgcagcaag
ctctggaagagcttcatccgcgagtgtgtgaagcattgcagcgtctcccccaagactctg
tccctggagcacatcgagcagagcgtggtccacaggcagcgctgggccctccgagcagag
agatctgtggcagccggggcccaggacactgtcccggaggagggggcagcaggggctcca
gccacagagcacgcagccacggagaaggtgcggccaggggccaaggctgaggggagtaca
tccccgtccgagacctcagcagcgggagacgaagccacgcggaggacagaggctggggac
gcagcgttagggtctgtggccgggggctgcccagcagtgggggacacggtgcacacggag
gcagaggacacaacgtcagcagggaactcatcagtgggggacttggcccccgggaaggcg
gcggcagggccgacggccatggagaatggggacgccgaggaccccgaggacgcggagtcg
gacttctggccttccgacacggagctcaacaccgacgactccatcctgcaggagctcctg
gatgaagcccggaatgtgatggtgaccgtccgggaagacgggctgctggacaccgtcgcc
aggcccgcgtccccacaccgggcccggcagtacaccaacctgccgcgggccacactgcgg
agacggctgtgctcggagcccgagctgtaccgccgctgcaccttcgtgcaggagaccttc
gaccgcgccacggccatgccgctggacgacgtggattccggccccatccagatcaggggc
cgcttgcgctgtgggatggccttcagcggggacgaggtgctggtgaaggtcctgggcgca
gacggaggctccgcggggaggctgcagggccaagtggtgggcgtgctcaagagggggcgc
cgcgagctggtgttcgtgtgccgcatggatgagtgggaccctcgcatcatgacccccgtc
gacggctccgtgacaaagatctttgtggccgagctgaaggacccgctgcaggtgcccgtc
caccgcgtccagcagggccgcgtgcagcgggtggggtacgagcggctcaccgccgaggac
cgcggcagccgcctcttctgggtgcgcattgtcctgtggcggcagcgtttctactatccg
ctgggcatcgtcctggaggtgctgcccgaggccaccacctgggagcagggcctccgcatc
ctggacctggagcacggcctgagggagccctcggtggagccggcgtgtgtcagcaaggca
ctgcagaagtaccgggcggagcttggccgggcgcccgactgccgggaggactgccgcggc
ttcctgaccttcaccgtggacccccagggcgcccgctacctggatgatgccctcagcgtt
cgagatctgggctccaggtacgaggtggccgtgcacattgccgacgtggccagctctgtc
cccagggatgggcctctggacctggaggcccgcagacggggcgtcacgttctacgcccct
gaccgggagcccgtgcctatgctgcctgcgggcctctgccaggatgcgttcagcctcctg
ccgggccaggaccgcttggccatttccctcttcctcaccattgagaagggcagtgaccag
ctcaaaagcctgcgcttcgcgccctctgtgatctgctctgaccgccagctgtcctacgag
gaagctgagcatgtgatcaagaggcacccgggtgccggccgtgagctgccagcccgcctg
gactccgtggacgcctgtgtcgtggccgcgtgccacctctcccgggtgctgcgccggggc
cgcctgcggaccgactcccactacgagcagcccagtgaggactgtgtgctgggcttccgt
gcggcccacgtcatggtcaaggagtacatgatccagttcaacagcctggtggccgagctc
ctggtgagcagtgagcccacgcggaccgtcacgccgctgcggtggcagcccacgcccagc
gagcgccagctcggagccctgtgtgagaagcacagggagctggtgccgctgtcgctgcac
ctgcgccaccacctggggggccgcggggcccccgtcgggcaggtctgcctcctggcctcg
ctgtggagacacctgcagtgtgcagcgagcgccggggacggtgactggctggcggacctc
atcaccacggacgacatgcaccccactctggctcccgtgggccttgacttccgcaaggcc
ctgggccgctcggtgtttggccgctcccgccaaggggaacggcaggcggctggccactac
tcgctgcaggtggactggtacacgtgggcgacctcgcccatccgcaggtacctggacgtg
gtgctgcagcggcagatcctgctggcgctgggccacgggggctccccctactctgccagg
gacatcgacgggctgtgccaggagttcagctgccagtatgggcgcgcccagagctaccag
cgccaggcccggagcctgcatctgggggcgcagctcagagtccggccgcggagcaagctg
ggcttcgtggtgggcgtggaggcgggcgcccgctgcttccggctgctcttccccgccgac
cccgagaccctgcctgacccctgccccgtgcattaccgctccctgcagctggctgagcac
cccagcgacctggagcggcggccgggcctgcggctggcgtggcggcgtcgcatctattcc
gtgcaggcagacaggccctgctccccacggcccggcaccctgttggactcacacacccgg
cgggtggacaccaccctgtggcagcagctgctgcagctggtgcaggaggagcggtggccc
gaggtggccgccctagtgcgggagcgcggtgccgcagagccccggcggcaggctctgggg
cacgtgaggcagagccgctgtggccgctttgtggaggtggcccgggagctgggcagcggg
gacacgctgcaggtgcagctcagtgccagcctgcagcggggcttcctcgtgccaagtctg
cagctgtgcaccgtggcgcccggcctcaccctctgcctggagcacgtggagcggcccggc
gactgcttcctggaccagacgccccagccggtgcgggaccactgtctcgacgtgggcgag
tactcccgcgtgtgggggccgttctgctccctggagtcggccaccagcgcggtctcggag
agcgaccccgtcatgctgcagcacgtgagcgtatcctgggatgcgaagcgggtggcacag
gggcagctgcaaggctccttctgcctggaaccttccttcctcagtgagcgctgcactgac
ctcaccttcggcccctggtacctctgcatccggctcgaggggctgccggccgtgcccgcg
gcaggggagctgcgccccccagctgtccctggccagcctcacctggcggccccgccctgc
gggcccctcctgagcatcgaccctgacacgtacacgtgggtggcccacgggctgacgaca
cactgggacacggaggagggccgggccgaccggcaggagatccccaggcaggtgcacttc
ttcatccagcacatggccgtggagaaggttccagaagaggtgctgagacctggcacccag
ttcaccattgaggtgttgcccaagcagcttcccgacattcgcaaggaagaagccgtgcgt
aggttggagagcgcatcccccctggtcgtcagcattgccctgggccagcccatccctccg
tcctgccaccttcctccccagcagacccgccacagagggacgtacagcaggctcctggag
aaacagacgttcgacctccctggaggcggccacaccctgaactccagccagaaccgggct
gtcagggccgctctgcagaagcggttcacggtgatccagggcccgccaggcacggggaag
acggtggtgggtttccacattgtgttctggtttcacaagtcaaacgaggagcaggcgatg
gcctggggggcccccagtgagaagcccgtagggggcccctacatcttgtactgcggcccc
tctaacaagtcggtggatgtcctggcaggactgctgctgagcaggagagcagagctgaag
cctctgcgcgtgtacagcgagcaggccgaggccacggaattcccggtgccgggtgtgggc
agcagcggcctgcccaagaagacccctcgggaggggaggcccaaccagaccctcaggagc
atcaccctgcaccacaggatccggcagtcctccaacccctatgcacctgacatcagggaa
ttcgatgcccggctgcagaaaggggaggtcttttccaaggacgacctcacccggtacaag
ctggtcctggggaaggcacggaagttcgagctggagcagcacagggttgtcctgtgcacg
tgctcgtgtgcggcctccaggagcctcaagaagctggccgtccggcagatcctcattgac
gaggcaggcatggccacagagcctgagaccctcatccccctggtgaccttctcgcaggcg
gagaaggtggttcttcttggggaccacaagcagctgcggcctgtggtcaagaatgagcag
ctgcaaaatctggggctggaccggtctctcttcgagaggtaccacatggacgcccacctg
ctggacacacagtaccgcatgcatgagggcatctgtgccttcccctccatggagttctac
aagaagaggctgaagacctggtgcggcctgaggcggccgcccagcatcctgggccacacg
ggcaaggagagctgctctgtcatcttcggccatgtgcagggccatgagcagagcctgctg
gtgtccacagatgaagggaacgaaaactccaaggccaacccggaagaggtggcacaggtg
gtccgcattgccaagcagctgaccctgggcaggacggtggaccccaaagacgtggccatt
ctcactccctacaatgctcaggctgccgagatcagcaagagtcttgggcgagagggtgtc
accggagtgaccgtgtgctccgtcaccaagagccagggaagcgagtggcgctacgtgctg
gtcagcaccgtccgcacgtgcccggagagtgacctggaccagcggccgaccaagagctgg
ctgaagaagttcctgggctttgtcgtggaccccaatcaagtgaacgtggccatcacccgg
gctaaggagggactctgcctcatcggagaccaccgcctcctgcgttgttgccctctctgg
cggaggttcctggacttctgtgaggaccagcggaccctcgtgcccgccagccaggtgcga
gttcggaggaggccagcagtgtctccctga
DBGET
integrated database retrieval system
