Ursus americanus (American black bear): 123798620
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Entry
123798620 CDS
T07931
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
uar
Ursus americanus (American black bear)
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
uar03041
]
123798620 (DDX1)
03016 Transfer RNA biogenesis [BR:
uar03016
]
123798620 (DDX1)
Enzymes [BR:
uar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123798620 (DDX1)
Spliceosome [BR:
uar03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
123798620 (DDX1)
Transfer RNA biogenesis [BR:
uar03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
123798620 (DDX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
DUF5766
Paramyxo_PNT
Motif
Other DBs
NCBI-GeneID:
123798620
NCBI-ProteinID:
XP_045663060
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH
GCRATKGLTKGKHYYEVSCHDQGLCRVGWSSMQASLDLGTDKFGFGFGGTGKKSHNKQFD
NYGEEFTMHDTIGCYLDIDKGHVKFSKNGKELGLAFEIPPHMKNQALFPACVLKNAELKF
NFGEEEFKFPPKDGFVALSKASDSYVVKSQHTGNAQVAQTKFLPNAPKALIVEPSRELAE
QTLNNVKQFKKYIDNPKLRELLIIGGVAARDQLSVLDNGVDIVVGTPGRLDDLVSTGKLN
LSQVRFLVLDEADGLLSQGYSDFINRIHNQIPQITSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPRTDRLWERLGKNHIRTDDVHAKDNTRPGAN
SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFMQQGGGPDKKGHQF
SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS
EIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGNYKGHVDILAPTVQELAALEK
EAQTSFLHLGYLPNQLFRTF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcggccttttctgagatgggtgttatgcctgagattgctcaagctgtagaggagatg
gattggcttctcccaactgatatccaggctgaatctatcccattgatcctaggaggcggt
gatgtacttatggctgctgaaacaggaagtggaaaaactggtgctttcagtattccagtt
atccagatagtttatgagactctgaaagaccaacaggaaggcaaaaaaggaaaaacaaca
attaaaactggtgcttcagtgctcaacaaatggcagatgaacccatatgatagaggatct
gcttttgcaattgggtccgatggtctttgttgtcaaagcagagaagtgaaggagtggcat
ggatgcagagctactaaaggattaacgaaagggaagcactactatgaagtatcctgtcat
gaccaaggattatgcagagttgggtggtcttccatgcaggcttccttagacctaggtact
gacaagttcggatttggctttggtggaacggggaagaaatcccataataaacaatttgat
aattatggagaggaattcactatgcatgataccattggatgttaccttgatatagataaa
gggcatgtcaaattctccaaaaatggaaaagagcttggtctggcatttgaaataccacca
catatgaagaaccaagccctctttcctgcttgtgttttgaagaatgccgaactaaaattt
aatttcggtgaagaagaatttaagtttccaccaaaagatggttttgttgctctttccaag
gcatcggatagttatgttgttaaatcacagcacacaggtaatgcgcaggtggcacaaaca
aagtttctccccaatgctccgaaagctctcatcgtcgagccctcccgagagttagctgaa
cagactttgaataacgtcaagcaatttaagaaatatattgataatcctaaattaagggag
cttctgataattggaggtgttgcagcgcgggatcagctctctgttttggataatggggta
gatatagtcgttggcactccaggaagactagatgatttggtgtcaactggaaagctgaac
ttatcccaagttcgattcctggtcctggatgaagctgatgggcttctttctcaaggttac
tccgattttataaataggattcacaatcagattcctcagattacctctgatgggaaaaga
cttcaggtgattgtttgctctgctactttgcattcttttgatgtgaagaagctgtctgag
aagataatgcattttcccacatgggttgatttaaaaggagaagactccgttccggacact
gtacaccatgttgttgtcccagtgaatcccagaactgacagactctgggaaaggcttggg
aaaaaccacattagaactgatgatgttcatgcaaaagataacacaaggcctggtgctaat
agtccggagatgtggtctgaagctattaaaatcctgaagggggagtatgctgtccgggca
atcaaggaacacaagatggatcaagcaattattttctgtagaaccaaaattgactgtgat
aacttggagcaatattttatgcaacaaggaggaggacctgataaaaaaggacaccagttc
tcatgtgtttgtcttcatggggacagaaagcctcatgaaaggaagcaaaacttggaaaga
tttaagaaaggagatgtacgattcttgatttgcacagatgtagccgccagaggaattgat
atccatggtgttccttatgtcataaatgtcaccttgcctgatgaaaagcaaaactatgta
catcgaattggcagagttggaagagctgaaaggatgggtctggccatttccctggtggca
acagagaaagaaaaggtttggtaccatgtgtgtagcagccgtggaaaaggatgttataac
acaagactcaaggaagatggcggctgtaccatctggtacaatgagatgcagttgctgtct
gagatagaagagcatctgaattgcaccatttctcaggtcgaaccagatataaaggtacca
gtggatgaatttgatgggaaggtcacctatggtcagaaaagggccgctggtggtggaaac
tataaaggccatgtggatattttggcacctacggttcaagagttggctgcccttgaaaag
gaggcgcagacatctttcctgcatcttggctaccttcctaaccagctgttcagaaccttc
tga
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