Uloborus diversus: 129222782
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Entry
129222782 CDS
T09235
Name
(RefSeq) general transcription factor IIH subunit 2-like
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
udv
Uloborus diversus
Pathway
udv03022
Basal transcription factors
udv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
udv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
129222782
09124 Replication and repair
03420 Nucleotide excision repair
129222782
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
udv03021
]
129222782
03400 DNA repair and recombination proteins [BR:
udv03400
]
129222782
Transcription machinery [BR:
udv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
129222782
DNA repair and recombination proteins [BR:
udv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
129222782
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
Motif
Other DBs
NCBI-GeneID:
129222782
NCBI-ProteinID:
XP_054713295
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Position
5:complement(33528090..33529412)
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AA seq
390 aa
AA seq
DB search
METEEELKGYRWETEYEKTWEAIREDEHGLLTSSLEEIVHKSRRKRLLEKKNLKLGMMRH
LYVIIDMSEAMSEPDLKPTRYLCTLKLLENFISEYFDQNPISQIGIIITKNKRAEKITEL
AGNPKQHISTLQSYAKNSCSGEPSLQNALELASQTLRFMPTHTSREILVIFGSLTTCDPG
DIYETIDTLVSQNIRCSVIGLAAELVVCRKITKTTHGTYNVVIDDTHFKELLNEQVSPPP
ATSSTESSLIRMGFPYHQSKSEGKPSMCMCHLDSKISHEGFGTEGYYCPQCNGKYCELPV
ECKACGLTLVSAPHLARSFHHLFPLDCFNEVLVSSLTAEADKYCYSCLTNFQEQTVYQCG
TCLKYFCLECDLFIHDSLHTCPGCSSSRKT
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccgaagaggaattaaaaggctaccggtgggaaactgagtatgaaaaaacatgg
gaagcaatccgggaagatgaacacggtttgcttacctcaagtttagaagaaattgttcat
aagtcacgaagaaaaagattgctggaaaagaaaaacttaaaattaggcatgatgcgtcac
ctatacgtaattatcgatatgtcagaagcaatgtcagagcctgatttaaaacctacaagg
tatctatgtaccttgaaattattggaaaacttcatcagcgaatattttgatcagaatcct
atcagtcagataggtattataataaccaaaaataaaagggctgagaaaatcaccgagtta
gctggcaatcctaaacaacatatcagtactctgcaaagttatgcaaaaaattcatgctcc
ggcgaaccttctcttcagaacgcgttagaacttgcatcccaaactttgcgttttatgcca
acacacactagccgggaaattctcgtcatatttggcagcttaacaacttgcgatcctggt
gatatctatgaaactattgatacactagtttcacaaaatattcgctgttctgttattggg
ttggcagcagaattagttgtgtgccgtaagataacaaaaaccacccatgggacttataat
gttgtgattgatgacacacatttcaaagaattattgaatgagcaagtttcgccaccacca
gctactagtagcacggaatcgtctttaatccgcatgggtttcccatatcaccagagtaaa
agtgaagggaaaccttcaatgtgcatgtgccatttagatagcaagatttcacatgaaggc
tttggtactgagggctattattgccctcagtgcaatggtaagtactgtgaacttccagtc
gagtgtaaagcttgtggtctgacgctggtgtctgctccacacttagctcggtcatttcat
catttgtttcctttggactgtttcaatgaagtgcttgtctcaagcttgacagccgaggct
gataaatattgttatagctgtttgacgaatttccaagagcaaactgtttatcagtgtggt
acttgccttaaatatttttgtttagaatgtgatctctttattcatgattctctacatact
tgtccaggttgttcaagttctagaaaaacatga
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