Uloborus diversus: 129230106
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Entry
129230106 CDS
T09235
Name
(RefSeq) general transcription factor IIH subunit 4-like
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
udv
Uloborus diversus
Pathway
udv03022
Basal transcription factors
udv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
udv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
129230106
09124 Replication and repair
03420 Nucleotide excision repair
129230106
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
udv03021
]
129230106
03400 DNA repair and recombination proteins [BR:
udv03400
]
129230106
Transcription machinery [BR:
udv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
129230106
DNA repair and recombination proteins [BR:
udv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
129230106
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
129230106
NCBI-ProteinID:
XP_054720482
LinkDB
All DBs
Position
9:complement(66157410..66255577)
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AA seq
456 aa
AA seq
DB search
MAVSKSLALKCKDLHEYLKTLSAATLEKLYNHPATCLAVFRELPTLSKHYVTRLLFVEQP
VPQAVIGSWLGQQFVKQHLDAVEALCELHIYMEYPVPGGLPGWILNPIFRKNLKIALLGG
GKQWEVCATLEKDKHARDVKFLDSYAMERWEALLHFMVGSQQSENTVSNDAINVLLHSGL
MRKENNSNTITTEGFQFLLMTTASQVWHFMLQYLDTVEERGLNLVDCLTFLFQLSFLSLG
KDYSTGEMGESMLMFLQHLRELGIVYQRKRRSGRFYPTRLAINLASGLKEVNLDVNKTGY
IVVETNYRVYAYTDSPLQIALIALFCEMMYRFPNFSVAVFTRESVREALRCGITADQIIK
FLQMHAHPEMLKQKPILPPTVVDQIRLWEMERDRFKFTEGVLYSQFLSQSDFELLCNYAQ
DVGVLIFSNPSRRVMLVSKIGHDDVKRFWKRHRQEH
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggcagtttctaaaagtctagctttgaaatgtaaagatttgcatgaatatttgaagacc
ttatctgctgcaactcttgaaaagttatacaatcatcctgcaacttgcttggctgtattt
agagagcttccaactttatcaaagcattatgttacccgccttttgttcgtggagcaacca
gtgcctcaagcagtaattggatcttggttagggcagcaattcgtaaagcaacatttagat
gctgttgaagcattatgtgagcttcatatttacatggaatatcctgttcctggtggtcta
cctggctggattctaaatcctatctttagaaaaaatttgaaaattgctttacttggaggt
ggtaaacagtgggaagtttgtgctacattggaaaaagataaacatgccagagatgtgaaa
tttttggattcatatgcgatggaacgctgggaagctctcttgcattttatggttggttct
cagcagtcagaaaatacagtaagcaatgatgccataaatgttttgcttcattcaggattg
atgcgaaaagaaaataattctaacactataacaactgaaggtttccagttccttttgatg
actacagcttcccaagtgtggcacttcatgcttcagtatcttgatacagttgaggaaagg
ggcttaaatcttgttgattgtcttacatttctttttcaactgagtttcctctcattggga
aaagattatagcacaggcgaaatgggagaatcaatgttaatgtttctccagcatttgcga
gaacttggtattgtgtaccaaagaaaacgccgatctggacgtttctaccccactcggctt
gcaattaatttagcttctggtttgaaagaagtaaatttggatgttaataaaactggctac
atagttgtggaaacaaattacagagtctatgcttacactgattcacctctgcaaattgca
ttgattgctttattttgtgaaatgatgtacaggtttccaaacttttctgttgctgttttt
acacgcgaaagtgtaagagaagctcttcgctgcggcattactgcagatcagataataaaa
ttcttacagatgcacgcacatccagaaatgttaaagcagaaacctattcttcctcctact
gttgttgatcagatacgtttgtgggaaatggagcgtgatcgtttcaaattcacagaaggt
gttttgtacagccagtttttgtctcaaagtgattttgaacttctttgtaactatgcccag
gatgtaggtgtattaatattcagcaatccttcaagacgtgtgatgcttgttagcaaaatt
ggccacgatgatgttaaaaggttttggaagaggcatcgacaagagcattga
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